Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00531 ATGGCTGATTCAGGTGGTTCTTCTACGAGAATGTGGTGTTCTATACCAGAACGGTTTCAGCTGCATGGGGCCATGCTGGTCCTCCAAGTTGGTTATGCTGGTTTCCATGTGGTCTCTAGAGCTGCCCTTAACATGGGAATTAGCAAACTGGTTTTTCCAGTTTACCGGAATCTTCTTGCTTTTCTTCTCCTTGTTCCATTTGCATACTTCTTGGAAAAGAAGGAAAGGCCAGCTATTAATTTCAACTTTCTTCTACACTTTTTTCTTCTTGCCCTCATCGGTTTTACAGCCAATCAAGGTTTCTACTTGCTTGGTTTGGACAATACATCTCCAACTTTTGCATCAGCTATACAAAACTCAGTTCCAGCCATTACATTTCTCATGGCAGTTGTACTCAGAATAGAGCAAGTGAGGTTGAACAGAAAGGATGGAATAGGAAAAGTTGCAGGAACAATATTCTGTGTGGCAGGAGCATCAGTGATTACACTTTACAAAGGTCCAACAATATACAGTCCAGTTCCACCCTCTCTAAACAACAACAATACCATACAAGAGAGTTTGTTTGAGTCATTAGGTGATGCAAAAGGAAAAAACTGGACCCTTGGATGTTTGTACCTTATAGGACATTGTTTGTCTTGGTCTGGTTGGCTGGTGTTACAAGCACCTGTCCTTAAGAAGTATCCAGCTCGTCTCTCTGTCACTTCCTATACATGTTTCTTTGGACTTATCCAATTCCTCATTATTGCTTTGATCTTTGAGAGAAACTCTCAGGCTTGGATTTTCACCTCTGGTGCTGAAGTTTTTACCATTCTTTACGGGGGAGTGGTAGCATCAGGAATTGCGTTCGCTGTACAGATATGGTGCATTGACAAAGGAGGACCTGTTTTTGTTGCAGTATATCAACCTGTTCAAACTCTTATTGTTGCTATCATGGCTTCTCTTGCTTTAGGAGAAGAATTCTACTTAGGCGGGATCATTGGAGCAGCACTGATCATTGTGGGGTTGTACCTAGTTCTGTGGGGTAAAAATGAAGAAAAGAAATTTGCAAGGGAGCTAGCAGCAACGACTTCGACTCCAGCCGAGCATAGCGGCATTATCAGGGCCTCAGGCCATCATGGAAAATCATCACTTATTCAACCTCTTCTTCCTTCATCAACGGAAAATGTTTGA 1170 0.4231 MADSGGSSTRMWCSIPERFQLHGAMLVLQVGYAGFHVVSRAALNMGISKLVFPVYRNLLAFLLLVPFAYFLEKKERPAINFNFLLHFFLLALIGFTANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVVLRIEQVRLNRKDGIGKVAGTIFCVAGASVITLYKGPTIYSPVPPSLNNNNTIQESLFESLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLIQFLIIALIFERNSQAWIFTSGAEVFTILYGGVVASGIAFAVQIWCIDKGGPVFVAVYQPVQTLIVAIMASLALGEEFYLGGIIGAALIIVGLYLVLWGKNEEKKFARELAATTSTPAEHSGIIRASGHHGKSSLIQPLLPSSTENV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00531 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 344 - -
Vivi3g00531 389 MobiDBLite consensus disorder prediction 365 389 - -
Vivi3g00531 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 165 - -
Vivi3g00531 389 Pfam EamA-like transporter family 30 162 IPR000620 GO:0016020
Vivi3g00531 389 Pfam EamA-like transporter family 201 339 IPR000620 GO:0016020
Vivi3g00531 389 PANTHER WAT1-RELATED PROTEIN 23 353 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00531 Vivi-Chr3 8953155 8955714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00531 1 389 Nodulin-like Gene Family AT1G75500 73.146 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00531 - - gmx:100786714 634.409