Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00507 ATGGCTGCAACTGTGGTGGGAGGCGCATTTCTCTCGGCTACAATTCAAATCATAGCAGACAGACTTACCTCCTCGGAGTTTCGTGTTTTCATCAGAAACACCAAGTTCAATTACTCACTACTGGAAGAGTTGAAAACAACACTATCAGCTCTTCAAGCTGTGCTGGCTGATGCAGAACAGAAGCAGTTTAAGGATCTTCATGTTAAACAATGGGTTGAAGACTTGAAAGATGCATTATTTGATGCTGAAGATTTGCTCAACTTAATCAGCTACGATGCCCTGCGATGCAAGGTGGAGAACACACCAGTTGATCAGCTGAAGTACTTGCCTTCAAAATCTATAAATATCAATTCAAAGATGGAGAAGATGTGTAAAAGGCTGCAAACTTTTGTCCAGCTGAAAAACATCCTTGGCTTGCAGAGAACTGTAAGTGGTAGAGATTCTCATAGAACGCCTTCGTGTTCAGTGGTAAACGAATCTGTTGTTGTAGGTAGGAAGGATGATAAGAATACACTCATCAATATGCTGGTATCAGACTGTGGCACAAGCAGAAATAATAACTTAGGTGTTGTTGCCATTTTGGGTATGGGAGGTGTCGGTAAAACTACTCTTGCACAACTTGTTTACAATGATGAAAAAGTTCAACAACATTTTGATTTCAAAGCTTGGGTTTGTGTATCCGAGGACTTCGATGTTGTGAGAGTAACCAAGTCTCTCCTTGAATCTGTTGTTAGAAATACAACATCTGCTGCTTCAAAGGTCTGGGAAAGTGATAATCTTGATATTCTTCGAGTTGAATTAAAGAAAAACTTGAGGGAGAAAAGATTTTTGTTTGTGTTGGATGATCTATGGAATGACAATTACAATGATTGGGATGAGCTGGTAAGTCCGCTCATTGATGGAAAACCTGGAAGTTCGGTAATTATAACAACACGTCAACAAAAAGTTGCAGCGATGGCACACACATTTCCAATTCATAAATTAGACCCTCTGTCACAAGAAGAATGTTGGTCTTTACTATCGAAGCATGCATTGGGAAGTGATGAGTTTCACGATAGTAAGAACACAGCCCTTGAAGAAATTGGCAGGAAGATTGCAAGAAAGTGTGGTGGATTGCCAATAGCGGCTAAAACACTAGGAGGTCTTCTACGTTCAAGGGTAGATAAAAGGGAGTGGACTGCAATTTTAAACAACAATGTATGGAATTTACCAAATGATAATATTATGCCTGCTTTGCATTTGAGTTATCATTATCTTCCCTCTCATTTGAAAAGATGTTTTGCATATTGTTCAATTTTTCCGAAGGACTATCCACTTGATAGGAAGAAAATGGTTTTGTTGTGGATGGCAGAAGGCTTCCTTGATTGTTCTCAAGGGGGAAAATCAGCGGAGGAATTAGGTGATGATTGTTTTGCTGAATTGTTATCTAGATCGCTAATTCAACAATCAAATGATGATGCTCGTGGAAAAATGTTTTTCATGCATGAACTTATCAACGATTTAGCTACAGTTGTATCTGGAAAAAGTTGTTCTAGGTTTGGAAGTGGCGACATCTCTGAAAAGGTTCGTTATTTGTCATATAATCAAGAAGGGTATGACACTCTCACAAAGTTCCCTACCCATTTCAAATGCTTGAGAAGCTTCTTACCCATTTACTATTGGAGCTTACAAATTTACTTATCCATGAAGGTGGTTGATGATTTGCTACCATCACTCGAATGGTTGCGTGTGTTATCTCTATCAGAGTATACAAACATCACCAAACTACCGGATTCTGTTGGCAATTTGAAGCAGTTGCGGTATCTAGACCTCTCCTCCACTAAAATACAAAGCTTGCCAGATACAGTATGTAAACTTTACAATTTGCAAAGCTTGATTTTATTAGGTTGCGTGTGTCTCACTGAATTGCCAGTTCATATGGGAAATTTAATCAGTTTACGTCATCTTGATATAAGTGGAACAGATATAAAGGAATTGCCAAAAGAAATTTGTGGACTAGAAAACCTTCAAACTTTAACCGTTTTTGTAGTGGGGAAGCAACAAGTAGGGTTATCTATCGAAGACCTTAAGAAATTTCCACATCTACGAGGAAAACTTACGATTAAGAACCTGCATCATATCATTGATGCCAAGGAGGCACATGATGCCAACTTGAAAAACAAAGAGCAAATTGAAGAGTTAGAACTGCTTTGGGGAAAACATAGTGAAGACTCGCAAAAAGTGAAAATTATGCTTGATATGTTGCAACCTTCAATGAACCTGAAGAGCCTTAAAATTGATTTGTATGGTGGGACAAGCTTTCCAAGTTGGTTGGGAGATTCTTCGTTTTCTAACATGGTGTCCCTTTGCATAAGTAATTGTGAATATTGTGTGACACTTCCACCGTTGGGGCAGCTAGCTTCTCTCAAGGACCTAGAAATATATGGTATGAAGATGCTGGAGACAATTGGCCCAGAGTTCTACAATGTCCAAGTAGGAGAAAGTTCCATTTCTTCCTTCCAACCATTTCCATCCCTTGAGCTTATGAAATTTCACGACATGCCAAATTGGAAGGAATGGCTTTCTTTTGAAGGAAGCAATTCTGCTTTTCCTCGTCTTAAAACTCTCGAGTTACACAAGTGTCCCGAACTTAGGCGACATTTTCCTATTCACCTCTATTCCATAGAAGAAATTGAAATAGAAGATTGCGGTCATCTATTGGAAACACCGCCTACTATGCATTGGCTAATGTCAATTAAAGAAATAAAAATTAGGGGAGATTTAGATTTTGAGGGGTCTAGTGAAAGAATCCAATGGCCGTTGCTTGAAAGTGGTTCTCCGTGCTTGCTGCAGAGTGTTGCGATTGATAGTTGTTTGGCGCTTTTGTCTCTGCCAAAGATGATTATGAGCAGCAGCTGTCTTCAATACTTGCATCTCTATCAAATTCCGTCTCTCATTTCATTTCCGATGGATGGTCTACCAACATCACTACAGTCAATTAGTATTCATTATTGTGCCAAGTTAGCATTCATGCCTCCTGAAACATGGAGCAATTACACGTCCCTTGTGAGTTTGACAATATTGAGTAGCTGTGATGCACTTACATCCTTCCAACTTGATGGTTTCCCTGCGCTCCAAATGCTTCACATTGGTTATTGTACTAGTCTAGATTCAATTTTTGTTTCAGAAAGTCCTTCATGTTATCCAACAAGACTCCAATCACTTGAAATCAGATCGCATGATTCAATTGGATTGTTTAAAGTCAAGCTTAAGATGGACATGCTCACTGCTCTTGAACATTTGGTTTTGGAATGCGGAGAGTTGTCATTTTTTGAAGGAGTTTCTCTACCTCCCAATTTGCAATCAATTGATATTCAGTTCCTAAAAACAACTCCGCCTGTAAGGGAATGGAGTCTTCAAGGCCTCACTGCTCTTTCAAGTTTTAGTATTGGAGGTTGTGTTGATATTGTTAACACCTTGTTAAAGGAGCCGCTGTTACCCATCTCCGTTGTGTCTCTGACTATCGGTTATCTCTATAAAATGAAGTCCTTTAAAGGAAATGGGCTTCAGCACCTCTCCTCTCTCGAAAATCTCCACTTTCGTAACTGTCAACAGCTTGAGTCGTTTCCAGAAAACTACCTCCCTTCCTCGCTGAAATCGCTTCAGTTTTGA 3651 0.3939 MAATVVGGAFLSATIQIIADRLTSSEFRVFIRNTKFNYSLLEELKTTLSALQAVLADAEQKQFKDLHVKQWVEDLKDALFDAEDLLNLISYDALRCKVENTPVDQLKYLPSKSININSKMEKMCKRLQTFVQLKNILGLQRTVSGRDSHRTPSCSVVNESVVVGRKDDKNTLINMLVSDCGTSRNNNLGVVAILGMGGVGKTTLAQLVYNDEKVQQHFDFKAWVCVSEDFDVVRVTKSLLESVVRNTTSAASKVWESDNLDILRVELKKNLREKRFLFVLDDLWNDNYNDWDELVSPLIDGKPGSSVIITTRQQKVAAMAHTFPIHKLDPLSQEECWSLLSKHALGSDEFHDSKNTALEEIGRKIARKCGGLPIAAKTLGGLLRSRVDKREWTAILNNNVWNLPNDNIMPALHLSYHYLPSHLKRCFAYCSIFPKDYPLDRKKMVLLWMAEGFLDCSQGGKSAEELGDDCFAELLSRSLIQQSNDDARGKMFFMHELINDLATVVSGKSCSRFGSGDISEKVRYLSYNQEGYDTLTKFPTHFKCLRSFLPIYYWSLQIYLSMKVVDDLLPSLEWLRVLSLSEYTNITKLPDSVGNLKQLRYLDLSSTKIQSLPDTVCKLYNLQSLILLGCVCLTELPVHMGNLISLRHLDISGTDIKELPKEICGLENLQTLTVFVVGKQQVGLSIEDLKKFPHLRGKLTIKNLHHIIDAKEAHDANLKNKEQIEELELLWGKHSEDSQKVKIMLDMLQPSMNLKSLKIDLYGGTSFPSWLGDSSFSNMVSLCISNCEYCVTLPPLGQLASLKDLEIYGMKMLETIGPEFYNVQVGESSISSFQPFPSLELMKFHDMPNWKEWLSFEGSNSAFPRLKTLELHKCPELRRHFPIHLYSIEEIEIEDCGHLLETPPTMHWLMSIKEIKIRGDLDFEGSSERIQWPLLESGSPCLLQSVAIDSCLALLSLPKMIMSSSCLQYLHLYQIPSLISFPMDGLPTSLQSISIHYCAKLAFMPPETWSNYTSLVSLTILSSCDALTSFQLDGFPALQMLHIGYCTSLDSIFVSESPSCYPTRLQSLEIRSHDSIGLFKVKLKMDMLTALEHLVLECGELSFFEGVSLPPNLQSIDIQFLKTTPPVREWSLQGLTALSSFSIGGCVDIVNTLLKEPLLPISVVSLTIGYLYKMKSFKGNGLQHLSSLENLHFRNCQQLESFPENYLPSSLKSLQF 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00507 1216 Gene3D - 147 323 IPR027417 -
Vivi3g00507 1216 SUPERFAMILY L domain-like 494 918 - -
Vivi3g00507 1216 PANTHER DISEASE RESISTANCE PROTEIN RP 41 896 IPR044974 GO:0006952
Vivi3g00507 1216 Gene3D Ribonuclease Inhibitor 532 931 IPR032675 -
Vivi3g00507 1216 Coils Coil 41 61 - -
Vivi3g00507 1216 Pfam NB-ARC domain 184 398 IPR002182 GO:0043531
Vivi3g00507 1216 PRINTS Disease resistance protein signature 594 610 - -
Vivi3g00507 1216 PRINTS Disease resistance protein signature 270 284 - -
Vivi3g00507 1216 PRINTS Disease resistance protein signature 190 205 - -
Vivi3g00507 1216 PRINTS Disease resistance protein signature 369 383 - -
Vivi3g00507 1216 Gene3D - 38 136 - -
Vivi3g00507 1216 SUPERFAMILY L domain-like 935 1215 - -
Vivi3g00507 1216 Gene3D Ribonuclease Inhibitor 1081 1216 IPR032675 -
Vivi3g00507 1216 Gene3D Ribonuclease Inhibitor 935 1079 IPR032675 -
Vivi3g00507 1216 SMART LRR_typ_2 643 666 IPR003591 -
Vivi3g00507 1216 SMART LRR_typ_2 596 619 IPR003591 -
Vivi3g00507 1216 Pfam Rx N-terminal domain 10 100 IPR041118 -
Vivi3g00507 1216 Gene3D - 330 414 IPR042197 -
Vivi3g00507 1216 FunFam Probable disease resistance protein At1g63360 416 504 - -
Vivi3g00507 1216 Gene3D - 415 504 IPR036388 -
Vivi3g00507 1216 FunFam Probable disease resistance protein At1g61300 146 322 - -
Vivi3g00507 1216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 430 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00507 Vivi-Chr3 8695851 8699991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00507 584 672 WRKY Transcription Factor Family AT4G12020 41.111 2.22e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00507 - - mtr:25500878 1601.65