Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00501 ATGTCAAAATCAATAGAACTCCCTAATTGCACCTATCCATGTGAACCAGTCACTATTATTCCACCAAGTGCTCCAACGCCAAAACATTCTCTCTATCTTTCCAATCTTGATGACCAAAAATTTCTTAGATTTTCAATAAAGTATGTATACATTTTCAAGAAATCAGTGAACATGAATAACTTGAAATCTTCTCTGGCTAGAGTTTTGGTGGATTATTACCCTTTAGCAGGGAGGTTGAGAAGATGTTCCTCTAATTTGGATGATGATGGTGATGATGAGAAGAAGCTTGAGGTGGATTGTAATGGAAAAGGTGGTTTGTTTGTTGAAGCTTTCATGGATATTACTGCAGATGAATTGGTTGAACATTCTAAGTTTCCGAATAAATCATGGAGGAAGTTTTTGTATAAGGTGGAATCTCAGAGTTTCTTAGATGTTCCTCCACTTATTGTTCAGTTAACAAGTCTCGGTTGCGGGGGAATGATTCTCTGCACCGCAATCAACCACGCTCTATGCGACGGAGTCGGAACATCTCAATTTCTCCATGCATGGGCACATCTCACCACATCCCCTCAAACCAATCTAACCATCCAACCTTTCCACTCACGCCACGTGTTACACCCACGACAACCACCCACCATAAACCTCCACAACCCCGCATACACCAGATCCCAGCCAAACCCTCAAATAAATCTCCACAAATCAATCCAATCACAACCTTTAGTACCCACATCCTTTACCTTTAATTCCACCCATATCCTCTACTTAAAAAAACAATGCATCCCATCACTAAAATGCACCACCTTTGAAATAATCGCTGCACACACGTGGCGTTCTTGGATTCGTTCATTAAATCTACCATTGCCATACAAGTTAAATGTGAAGCTACTTTTCTCCGTTAATTTTCGCTCCGTTATGAATTTACCAAAAGGATATTACGGAAATGGATTTTTATTAGCATGTGCCGAAAGTAAAATAGAGGATTTAGTGGGAAATAATAATAACAATCTCCACTATGTTGTGAAGTTAGTACAAAAAGCAAAATCAACGGTGAATGATGAGGAGTATATAAGATCAACAGTTGATTTGTTGGAGGATAAAACGGTAAAAACCGATGTTTCGACTAGTTTGGTTATATCGCAATGGTCAAAACTGGGGTTAGAAGATGTGGATTTTGGAGAGGGGAAAGCATTGCATATGGGTCCTTTGACAAGTGATATTTATTGTTTATTTTTACCGGTGATTGGTGGTGGTGATGGTGTGAGAGTGGTGGTTTCTGTGCCGGAGAGTATGGTGGAGAGTTTTAAGTATCAGATGAGTGGAAATTGGGAGAAGAAAATGGAGGATGAAGATATGGTTAAGAATGAATTTCATGCGAATGAGATTTCGTTTTTGTGA 1395 0.3921 MSKSIELPNCTYPCEPVTIIPPSAPTPKHSLYLSNLDDQKFLRFSIKYVYIFKKSVNMNNLKSSLARVLVDYYPLAGRLRRCSSNLDDDGDDEKKLEVDCNGKGGLFVEAFMDITADELVEHSKFPNKSWRKFLYKVESQSFLDVPPLIVQLTSLGCGGMILCTAINHALCDGVGTSQFLHAWAHLTTSPQTNLTIQPFHSRHVLHPRQPPTINLHNPAYTRSQPNPQINLHKSIQSQPLVPTSFTFNSTHILYLKKQCIPSLKCTTFEIIAAHTWRSWIRSLNLPLPYKLNVKLLFSVNFRSVMNLPKGYYGNGFLLACAESKIEDLVGNNNNNLHYVVKLVQKAKSTVNDEEYIRSTVDLLEDKTVKTDVSTSLVISQWSKLGLEDVDFGEGKALHMGPLTSDIYCLFLPVIGGGDGVRVVVSVPESMVESFKYQMSGNWEKKMEDEDMVKNEFHANEISFL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00501 464 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 435 - -
Vivi3g00501 464 Gene3D - 222 437 IPR023213 -
Vivi3g00501 464 Gene3D - 15 221 IPR023213 -
Vivi3g00501 464 Pfam Transferase family 18 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00501 Vivi-Chr3 8605433 8609830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00501 18 401 Monolignol Biosynthesis Gene Families AT5G48930 29.216 2.07e-41 151