Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00485 ATGGCTGATTCAGGTGGTTCTTCTACGAGAATGTGGTGTTCCATACCAGAACGGTTTCAGCTGCATGGGGCCATGCTGGTGCTGCAAGTTGGTTACGCTGGTTTCCATGTGGTCTCTAGAGCTGCCCTTAACATGGGAATTAGCAAACTGGTTTTTCCAGTTTACCGGAATCTTCTTGCTTTTCTTCTCCTTGTTCCATTTGCATACTTCTTGGAAAAGAAGGAAAGGCCAGCTATTAATTTCAACTTTCTTCTGCACTTCTTTCTTCTTGCCCTCATCGGTTTTACAGCCAATCAAGGTTTCTACTTGCTTGGTTTGGACAATACATCTCCAACTTTTGCATCAGCTATACAAAACTCAGTTCCAGCCATTACATTTCTCATGGCAGTTGTACTCAGAATAGAGCAAGTGAGGTTGAACAGAAAGGATGGAATAGGAAAAGTTGCAGGAACAATATTCTGTGTGGCAGGAGCATCAGTGATTACACTTTACAAAGGTCCAACAATATACAGTCCAGTTCCACCATCTCTAAACAACAACAATACTACCATACAAGAGAGTTTGTTTGAGTCATTAGGTGATGCAAAAGGAAAAAACTGGACCCTTGGATGTTTGTACCTTATAGGACATTGTTTGTCTTGGTCTGGTTGGCTGGTGTTACAAGCACCTGTCCTTAAGAAGTATCCAGCTCGTCTCTCTGTCACTTCCTATACATGTTTCTTTGGACTTATCCAATTCCTCATTATTGCTTTGATCTTTGAGAGAAACTCTCAGGCTTGGATTTTCACCTCTGGTGCTGAAGTTTTTACCATTCTTTACGGGGGAGTGGTAGCATCAGGAATTGCGTTCGCTGTACAGATATGGTGCATTGACAAAGGAGGACCTGTTTTTGTTGCAGTATATCAACCTGTTCAAACTCTTATTGTTGCTATCATGGCTTCTCTTGCTTTAGGAGAAGAATTCTACTTAGGCGGGATCATTGGAGCAGCATTGATCATTGTGGGGTTGTACCTAGTTTTGTGGGGTAAAAATGAAGAAAAGAAATTTGCAAGAGAGCTAGCAGCAACGACTTCGACTCCGGCCGAGCATAGCGGCATTATCAGGGCCTCAGGCCATCATGGAAAATCATCACTAATTCAACCTCTTCTTCCTTCATCAACGGAAAATGTTTGA 1173 0.4237 MADSGGSSTRMWCSIPERFQLHGAMLVLQVGYAGFHVVSRAALNMGISKLVFPVYRNLLAFLLLVPFAYFLEKKERPAINFNFLLHFFLLALIGFTANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVVLRIEQVRLNRKDGIGKVAGTIFCVAGASVITLYKGPTIYSPVPPSLNNNNTTIQESLFESLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLIQFLIIALIFERNSQAWIFTSGAEVFTILYGGVVASGIAFAVQIWCIDKGGPVFVAVYQPVQTLIVAIMASLALGEEFYLGGIIGAALIIVGLYLVLWGKNEEKKFARELAATTSTPAEHSGIIRASGHHGKSSLIQPLLPSSTENV 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00485 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 345 - -
Vivi3g00485 390 PANTHER WAT1-RELATED PROTEIN 23 354 IPR030184 GO:0016020|GO:0022857
Vivi3g00485 390 Pfam EamA-like transporter family 202 340 IPR000620 GO:0016020
Vivi3g00485 390 Pfam EamA-like transporter family 30 162 IPR000620 GO:0016020
Vivi3g00485 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 165 - -
Vivi3g00485 390 MobiDBLite consensus disorder prediction 366 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00485 Vivi-Chr3 8197317 8200024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00485 1 390 Nodulin-like Gene Family AT1G75500 73.214 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00485 - - gmx:100798686 636.721