Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00427 ATGCTTTCCCAATTGGTAAAGGAACATTCTTATATGTGTTACCATGTTGGTCTCTTATTGCTGTTTTTATCATGTTTTAAAATGTTGTCAGCACTTTGGTGCAAAAAAAACAAGTCCAATAGTGTTGGAAGTCCTCCGGGAAATAGAGGATTACCCTTCATAGGAGAGACACTGCATTTCATGGCTGCCATCAATAGTACTAAAGGAGTCTACGAATTTGTTCGACTTCGCCGCCTCCGATATGGAAATTGCTTCAAGACCAAGTTATTTGGGGAAACACATGTATTTATTTCGAGTAAGGATTCAGCGAAAACGATTCTAAGAAACGAAGGAGGGAAGTTCTCAAAAAAGTACATAAAGACAATCTCCAAGCTCTTGGGTCCTGATAGTTTGCTCTGTGCAGCTGAGCAGCATCACAAACTCATTCGAAGCCGTCTTTTCAGTTTGTTCTCACCTCATTCTTTGTCTTCCTTTGTTCAACTCTTCGATGGACTTGTAGCTGAAGCTACAAGTGCATGGAAATGTGGATCCCTTCTCATCATACAAGATGAAGCCCTCAAGCTAGCTTGTAAGGCAATGTGCAAGATGCTAATAAGCATTGAGAATGGTGATGAACTAATGGTGATGCAAAAGAATGTTACTTGTGTGTCTGAAGCAATGCTTGCATTGCCTTTGAGATTACCATGGACCAGATTCTACAAAGGTCTTCAGGCTCGAAAAAGAATTATGAACATATTGGAGAAAGTTATTAGTGAAAGAAGAAGCGGAATCACAACTAGCCATGTAGATTTTCTTCTGCAACTTTTGACAAATGATGATAATAAATTAGAAAAAGATGAAGTTATAACAAGGCTAACAGATGAAGAGATCAAAGATAATATCTTAACTATGATAATTGCTGGACAAGACACTATAGCAATTGCAGTGACATGGATGATCAAATTTTTGGACGAGAATCAAGAGGTTCTCAATGAGCTTAAGAAGGAACAAGTTGAGATTGAGAAAAAATGTAGAGGAAGTATGAATCTTACATTAGAGATTCTTTCTCAGATGCAATATGCTTCCAAGGTGGTAAAAGAAGCATTAAGAATGGCATCTGTAGTGCAATGGTTGCCTAGAGTAGCACTTGAGGACTGCGAAATTGAAGGATTTGAGATCAAAAAAGGTTGGAACATTAATATTGATGCTAGATCAATACATCATGATCCAAGTATTCACAGCGCCCCGAATGTGTTCAATCCTTCAAGATTTCCGAGTGAGTCAAAACCAAACAGCTTCTTAGCTTTTGGGATTGGAGGAAGAATGTGTCTTGGGAAGAACATGGCTGAAGGAATGATGTTGGTGTTTCTTCATCGTTTCGTTACTCGTTTCAAGTGGAAGGTGATTGATTCTGACTCGAGTATTCAAAAATCAGCACTTTTTACGAAACTTAAGAGTGGTTATCCGATACGTTTGATATATGTGAAGGAAGAAGAAATGAACAAAAAAATTGTGTGA 1497 0.3808 MLSQLVKEHSYMCYHVGLLLLFLSCFKMLSALWCKKNKSNSVGSPPGNRGLPFIGETLHFMAAINSTKGVYEFVRLRRLRYGNCFKTKLFGETHVFISSKDSAKTILRNEGGKFSKKYIKTISKLLGPDSLLCAAEQHHKLIRSRLFSLFSPHSLSSFVQLFDGLVAEATSAWKCGSLLIIQDEALKLACKAMCKMLISIENGDELMVMQKNVTCVSEAMLALPLRLPWTRFYKGLQARKRIMNILEKVISERRSGITTSHVDFLLQLLTNDDNKLEKDEVITRLTDEEIKDNILTMIIAGQDTIAIAVTWMIKFLDENQEVLNELKKEQVEIEKKCRGSMNLTLEILSQMQYASKVVKEALRMASVVQWLPRVALEDCEIEGFEIKKGWNINIDARSIHHDPSIHSAPNVFNPSRFPSESKPNSFLAFGIGGRMCLGKNMAEGMMLVFLHRFVTRFKWKVIDSDSSIQKSALFTKLKSGYPIRLIYVKEEEMNKKIV 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00427 498 Gene3D Cytochrome P450 33 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00427 498 SUPERFAMILY Cytochrome P450 43 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00427 498 Coils Coil 316 336 - -
Vivi3g00427 498 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Vivi3g00427 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Vivi3g00427 498 CDD CYP90-like 77 485 - -
Vivi3g00427 498 PANTHER CYTOCHROME P450 26 44 463 - -
Vivi3g00427 498 Pfam Cytochrome P450 45 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00427 498 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00427 498 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00427 498 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00427 498 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00427 498 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00427 498 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00427 498 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00427 498 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00427 498 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00427 498 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00427 Vivi-Chr3 7396908 7399928 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00427 11 459 Cytochrome P450 AT1G19630 55.088 7.06e-179 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00427 - - lang:109327951 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00427 3 7396908 7399928 Vivi3g00427 3 7396908 7399928 ECH