Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00386 ATGTCTAAACGCTTCAAGATGAAATTCACAATCCCTTCTCTTCAAATGTGTCGCTCCAATGACCTTTCCTCTCTCCCCGGAAATCCCGTCCCCGCCATATACCGCCTTTCTCCGGTGAACTCCAAAGCACATGACATAGGATATCCAAACATCTCGCCGACTTCTTCACCGGAACACCAATGCAAGGTGTCCTCAAAGATCAACAAAGCGAAAACCAAAGGCCGAAAAAGTACCTCTAGTGTCCCAACTAAAAAGAGTGAGTTTCTCATTGATAAAATCAATGAAGAAGAAAGTGAAACTTTGATTTCTTGCTTGTCAAGACTCTCCAACGACGAAGATACCGCGATCCATGAGAAAACGGAGAATAAAGATTTAGTTAGCAGGAATAGAAGGAGGATAAATAGTGTAAAGAAGGTTGAAAGAGTGAGGTTTCAAAGTACTATAGAAAAACAAAGAGGAGTAGAAACTAAGGTTATGATGAGTAGAATGGAAGAGAAGGTGAAAGAGAGTTTTGCTGTGGTGAAAAAGTCAAAGGATCCTTATGAAGACTTCAAGAAATCAATGATGGAGATGATAGAAGAGATGGAGATGTCAGAAGCCAAGGATTTAGAGCAACTTTTGCAATGTTTTTTGGCTTTGAATTCTAGGGATTATCATGGAGTAATTGTGAGAGCTTTCATGGAGATTTGGCAACAAATGTTTGTTTGGAACCCTAAGTCAAGTAGAAATATTCAAACAAATGTTCAAAGTGAGGATGTAGAAAAGTAG 768 0.3932 MSKRFKMKFTIPSLQMCRSNDLSSLPGNPVPAIYRLSPVNSKAHDIGYPNISPTSSPEHQCKVSSKINKAKTKGRKSTSSVPTKKSEFLIDKINEEESETLISCLSRLSNDEDTAIHEKTENKDLVSRNRRRINSVKKVERVRFQSTIEKQRGVETKVMMSRMEEKVKESFAVVKKSKDPYEDFKKSMMEMIEEMEMSEAKDLEQLLQCFLALNSRDYHGVIVRAFMEIWQQMFVWNPKSSRNIQTNVQSEDVEK 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00386 255 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 68 234 IPR038933 GO:0045892
Vivi3g00386 255 ProSiteProfiles OVATE domain profile. 173 232 IPR006458 -
Vivi3g00386 255 Pfam Transcriptional repressor, ovate 177 234 IPR006458 -
Vivi3g00386 255 Coils Coil 181 201 - -
Vivi3g00386 255 NCBIfam uncharacterized plant-specific domain TIGR01568 171 233 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00386 Vivi-Chr3 6753709 6754570 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vivi3g00386 Ovate 1.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00386 - - gmx:102662518 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00386 3 6753709 6754570 Vivi3g00386 3 6753709 6754570 ECH