Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00372 ATGGAGAGATTTTATAATTCTTCTGAACAGCGTGATGACGATAGCTATAGCAATCCGAGTACGTCGCAGAGGGAATTGGAAGTTGATTTCAACGACGTGTTTGGGGGACCGCCGCGGCGGTCGTCGGGGTTCAGTGGAGAAGAAGGTGAATCGGGATGCTGTAAGTGGCCGATGGAGGGTGAGAGAGGGAAATCGGTGTTTGGTGATGATAGTGGAGTTAGAAGACGTTACACAAACAAAAAGGCTAAAGATTTCTTTGATGATATATTTGGAGGAGAAGAATCTCAGTCTCAGTCTCAGAGTCCGAGTGGGTGTTCAACGCCGAAGAAACGCGATCTTCAGCCACTTGCGTCTTCTCTCCCTCCATCCTTCAGCCTTCCGGCCACATCGACGAAAGGGATATTTGGTTCACCTCCTAGTAGTAGGAATCCGCTCGACAATAATATTGCTGCTTCAAATGGATTAGTGTTCTCAGATTCTAATCTATCTCGATTTTCAGCTCAACATAAGGAGTCGCGAAAGGATTTGAAACCGTCTAACAGGCAAAGTCTGCTATCGAAGGAGTTTTCAAACTCGGGCCTATCTGATAAAGTAGACAAAGGAAACATTATGAAACAGGACACGTCTGTTACTGAAGTTTCTCCGGATGATAATGATAATACCAGCAATGAGAAGTTTCATTTCTCAATATATAAATGGGCGAGTAAAGGGGTGACTTTGGCAATGCCTATTAGGTCAGAGAGAATCTCAAGGTCAAAAAATAAGTTTAAACTCGAGAAATGCTCGAGCGCTAAGGATTGGATCGTCACTGAGATTACCACTCAAAATGATAGTCCTATAGTGTACAATGATTCTTCTTTGACTAGAAATGAAAAACAAGATGTGTCAAAAACTACCACAACCATTCAAAACAAGGTAGATTCAGACCAGACGGTAAAACATAGAGTTTCTGGCAAAGATTCAATTGATTCATTGAGCAGCCGTGAAACTCTTATCAAAGATGTTCTTGTCAGTCCTGTCACAAAAGAGTCCAAAGCAGAATCAAATACTCTTTCTACAAGTGAGATAGTCTTCTATGGAAAAATCGAAGCAGCAAATGAAACTCAGAAGCATGATTCCAAATCATTAAATTCTCTGTTCGGTAAAAGTAATAAGAAACAAGATGATGATGCGATAACTAGAAAGGCAAAAGAAGGAAACAAGGGGAAAAGCTCAAAGAAATTGTCTTCTAATCTTGATATTCCTATAAATCCAAAGCAAGATGATGGAGAGATAACTAGAAAAACAAGAGAAGAAAACACAGCAAAAAGCTCAAAGAAGTTGTCTTCTAATGTTGATATTCCTATAAATCCAAAGGAGCAAGTTTTGACAGGTGATGGTGAGATAACTAGAAAGGCAAGAGAAGGAAACACAGCGAAAATCTCAAAGAAACTGTCTTCTAATTTTGATATTCATGTGAATCCAAAGAAGCAAGATGAAAAGCGAAAGACAGTTCCCATGAGAGGTGTAGAATATAGCAAAGTTACTTCTGAGGCTTTATTAAGCCCAGGCAGAAGAAGTATGGGGAAAGGCCGAGTTAAAGGAAAGGTCAAAGACTTCGTTCAAATATTCAACCAAGACGCTGAAACAAAGCCCAAAGCCGACTCAAAATCTCGACTTCAGGGTTATGCATACAAGCAGAAAGGAGCTGTGAGGGCAAATAATGATGTGGATGGTGAAGCTGAAAAGTCCCGGAAGGAGATCTCTAACATAGAGATCACGGACATGCCTGCCAATAGTTTTTCACAGCAGGATGATATCTCAGCATCAGAAATTCATGACATTTCATTTGCGGAAGATATAGGAGATAAAGACGAGTCCTTCCATGAGAATTTCACGATCCAAGTATTATCCGAAGATGAGGGTGAGGTCGCACAGAACCAAGAAATTCAAGAAATCCAAGTTATTGACAAGAAGATTCAACAATGGTCTAAAGGGAAGGAAGGAAACATACGCTCGCTGCTGTCTACATTACAATACGTACTTTGGCCAAACTGTGGCTGGAAGCCTGTGCCTCTTGTCGATATTATTGAAGGGAATGCGGTGAAAAGATCATATCAAAGAGCTTTACTCAGTCTGCATCCAGATAAGTTGCAGCAGAAGGGTGCGACTTCGGAACAAAAATACATTGCCGAAAAAGTTTTTGATATTTTACAGGAGGCATGGACTCAATTCAACATGGTTGGTCCACTCTAA 2235 0.4076 MERFYNSSEQRDDDSYSNPSTSQRELEVDFNDVFGGPPRRSSGFSGEEGESGCCKWPMEGERGKSVFGDDSGVRRRYTNKKAKDFFDDIFGGEESQSQSQSPSGCSTPKKRDLQPLASSLPPSFSLPATSTKGIFGSPPSSRNPLDNNIAASNGLVFSDSNLSRFSAQHKESRKDLKPSNRQSLLSKEFSNSGLSDKVDKGNIMKQDTSVTEVSPDDNDNTSNEKFHFSIYKWASKGVTLAMPIRSERISRSKNKFKLEKCSSAKDWIVTEITTQNDSPIVYNDSSLTRNEKQDVSKTTTTIQNKVDSDQTVKHRVSGKDSIDSLSSRETLIKDVLVSPVTKESKAESNTLSTSEIVFYGKIEAANETQKHDSKSLNSLFGKSNKKQDDDAITRKAKEGNKGKSSKKLSSNLDIPINPKQDDGEITRKTREENTAKSSKKLSSNVDIPINPKEQVLTGDGEITRKAREGNTAKISKKLSSNFDIHVNPKKQDEKRKTVPMRGVEYSKVTSEALLSPGRRSMGKGRVKGKVKDFVQIFNQDAETKPKADSKSRLQGYAYKQKGAVRANNDVDGEAEKSRKEISNIEITDMPANSFSQQDDISASEIHDISFAEDIGDKDESFHENFTIQVLSEDEGEVAQNQEIQEIQVIDKKIQQWSKGKEGNIRSLLSTLQYVLWPNCGWKPVPLVDIIEGNAVKRSYQRALLSLHPDKLQQKGATSEQKYIAEKVFDILQEAWTQFNMVGPL 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00372 744 MobiDBLite consensus disorder prediction 1 74 - -
Vivi3g00372 744 Gene3D DnaJ domain 640 744 IPR036869 -
Vivi3g00372 744 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 13 739 - -
Vivi3g00372 744 MobiDBLite consensus disorder prediction 383 404 - -
Vivi3g00372 744 SUPERFAMILY Chaperone J-domain 638 738 IPR036869 -
Vivi3g00372 744 MobiDBLite consensus disorder prediction 420 437 - -
Vivi3g00372 744 MobiDBLite consensus disorder prediction 368 468 - -
Vivi3g00372 744 MobiDBLite consensus disorder prediction 11 27 - -
Vivi3g00372 744 MobiDBLite consensus disorder prediction 166 181 - -
Vivi3g00372 744 MobiDBLite consensus disorder prediction 182 197 - -
Vivi3g00372 744 MobiDBLite consensus disorder prediction 92 108 - -
Vivi3g00372 744 MobiDBLite consensus disorder prediction 118 151 - -
Vivi3g00372 744 MobiDBLite consensus disorder prediction 88 151 - -
Vivi3g00372 744 FunFam J-domain protein required for chloroplast accumulation response 1 640 743 - -
Vivi3g00372 744 MobiDBLite consensus disorder prediction 166 221 - -
Vivi3g00372 744 MobiDBLite consensus disorder prediction 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00372 Vivi-Chr3 6600458 6605148 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00372 - - vvo:131660169 1402.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00372 3 6600458 6605148 Vivi3g00372 3 6600458 6605148 ECH
Vivi4g05819 4 194594363 194602071 Vivi3g00372 3 6600458 6605148 PCT