Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00358 ATGGCATCATCATCATCATCCTCCCTTATCTCTTTATCTTCTACTTTCCTACAAAAGGACATTCTATTAAAGAGAACAACAACAAAATCCCCCATCTCCAAATGTCCTCTTAATTCTATAAAAGCGTCAGTGTCGATGTCCGAAACTGAAGCAACCACATCATCAGTACCATTGAGAAAAATACCAGGAGATTATGGCCTCCCTTTTATAGGACCCATCAAAGACCGTCAAGATTATTTCTACAACGAAGGCCAAAACAATTTCTTCAAAAACCGAATCCAAAAATATAACTCAACCGTTTTTCGCGCCAATATGCCACCTGGCCCTTTCATTTCATCCAACCCAAACGTCATCGTTTTACTCGACGGCAAATCCTTCCCTATCCTCTTCGACGTTTCCAAAGTAGAAAAACGAGACCTCTTCACCGGAACTTACATGCCTTCCACAGAACTCACCGGCGGTTACCGAATTCTCTCTTACCTCGACCCCTCCGAACCAAAACACGATCAACTCAAACGCTTTCTCTTCTTCCTCCTCAAATCTCGTAGCAGCCATTTCATTCCTGAGTTTCATTCATCTTACACAAACCTCTTCGAAACACTGGAGAAAGACCTTGCGAAAAACGGAAAAGCGCCTTTCGGTGAGTCCAGCGATCAAACAGCTTTTAACTACCTTGCAAAAGCATTCTACGGAGTTAATCCTTCCGAAACAAAACTCGGAACAGATGCTCCGAGTATAATAACGAAATGGACCGCGCTTCAGCTCGGTCCAATTCTTACCATCGGTCTCCCGAGGTTAATCGAGGAGCCACTTCTTCACACTTTTCTTCTTCCACCAGCTTTGGTGAAGAAAGATTACCAGAGACTTTATGAGTTTTTCTACGAGTCATCTTCCGGACCGATTCTCGATGAAGCGGTTCGGCTCGGGGTTTCTAAAGAAGAAGCGGTTCACAATCTTATATTCGCCACTTGTTTTAATTCATTTGGTGGAATGAAGATTTTGTTTCCAAGTATGATAGGGTATATTGGAGAAGCGGGGGTTAATCTTCATGCTAAGTTAGCGAAAGAGATTAGATCTGTTGTTAAATCCAACGGCGGGAAAGTGACGATGGCTGGGTTGGAGCAAATGCCGTTGATGAAATCAGTGGTCTATGAAACACTTAGAATTGATCCACCGGTGCCGTTTCAATACGCGAAAGCGAAACGTGATTTAGTGATTGAGAATCACGAGAATGCGTTTCAAGTGAAGGAAGGTGAAATGCTGTTTGGTTATCAACCGTTTGCGACTAAGGACCCTAAGATATTTGATAGGGCTGAGGAGTTTGTTGGGGATAGGTTTTTGGGGGAAGGGGAGAAGTTGTTGAAACATGTTCTATGGTCGAATGGTCCTGAAACGGAACAAACGAATGCTGGTAATAAGCAGTGTGCTGGGAAGGATTTTGTTGTGTTGTTTTCTAGACTTTTGGTGGTGGAGTTGTTTCTAAGATATGATACTTTTGAAGTTGAAGTTGAAAAGAGTGCAGCAGGATCGGCTGTTACCTTTACCTCATTCAAGAAAGCAACCTTTTAG 1569 0.4283 MASSSSSSLISLSSTFLQKDILLKRTTTKSPISKCPLNSIKASVSMSETEATTSSVPLRKIPGDYGLPFIGPIKDRQDYFYNEGQNNFFKNRIQKYNSTVFRANMPPGPFISSNPNVIVLLDGKSFPILFDVSKVEKRDLFTGTYMPSTELTGGYRILSYLDPSEPKHDQLKRFLFFLLKSRSSHFIPEFHSSYTNLFETLEKDLAKNGKAPFGESSDQTAFNYLAKAFYGVNPSETKLGTDAPSIITKWTALQLGPILTIGLPRLIEEPLLHTFLLPPALVKKDYQRLYEFFYESSSGPILDEAVRLGVSKEEAVHNLIFATCFNSFGGMKILFPSMIGYIGEAGVNLHAKLAKEIRSVVKSNGGKVTMAGLEQMPLMKSVVYETLRIDPPVPFQYAKAKRDLVIENHENAFQVKEGEMLFGYQPFATKDPKIFDRAEEFVGDRFLGEGEKLLKHVLWSNGPETEQTNAGNKQCAGKDFVVLFSRLLVVELFLRYDTFEVEVEKSAAGSAVTFTSFKKATF 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00358 522 CDD CYP74 90 515 - -
Vivi3g00358 522 Pfam Cytochrome P450 350 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00358 522 PANTHER CYTOCHROME P450 26 57 497 - -
Vivi3g00358 522 SUPERFAMILY Cytochrome P450 56 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00358 522 FunFam Allene oxide synthase, chloroplastic 56 522 - -
Vivi3g00358 522 Gene3D Cytochrome P450 56 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00358 522 PRINTS E-class P450 group IV signature 376 392 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00358 522 PRINTS E-class P450 group IV signature 429 447 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00358 522 PRINTS E-class P450 group IV signature 475 493 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00358 Vivi-Chr3 6338476 6340384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00358 1 522 Cytochrome P450 AT5G42650 64.054 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00358 K01723 - gmx:100807192 743.806