Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00352 ATGGCATCATCATCACTTACCTCTGTCGCTTCCCCTTTCCTTCAAACTGAATTTCGATCAAAAAGAACTGCAAAATTCCACACTCGCTGCTCCATATCCAAATGCCCTTTCACTCCACTTTCAGTTGCTCCATTAAAAGCATCTGTATCCAACACAAACACTTGTCCAATAACAACAAACTCGGTGTCCGACACAGATACAACTCCAATAACAACACCAGTATCATCTGACACAGATACTGACACGACACAGACACCAGTTCAACAAGAACCATTACCCCAATTAGAAACAACAAAAAACCTCCCACTCCGAAGAATTCCCGGAGATTACGGCCTCCCTTTTGTAGGTCCCATCAAAGACCGTCTAGACTATTTCTACAACGAAGGTCGTGACAAATTCTTCCGCACCCGAATCCACAAATACAAATCAACCGTTTTTCGCGCCAATATGCCACCTGGCCCTTTCATTTCATCCAACCCAAACGTCATCGTTTTACTCGACGGAAAATCCTTCCCTATTCTCTTCGACAACTCCAAAATAGAAAAACGAGACCTCTTCACCGGAACTTTCATGCCATCCCTAGAACTCACCGGCGGTTACCGAATCCTCTCTTACCTCGACCCCTCCGAACCAAAACACGATCAACTCAAACGATTTCTCTTCTTTCTCCTCAAATTCCGAAGCTCCCATTTCATTCCTGAGTTTCGTTCGTCTTACACAAAACTCTTCGACACTCTAGAGAAAGATCTTGAGAAATCCGGAAAAGCGGTTTTCGCTGATGTTAACGATCAAGAAGCTTTTAACTACCTTTCAAAAGCATTTTTCGGAGTTAATCCTTCCGAAACAAGTCTCAAAACCGATGGTCCAAGCATAGTAACGAAATGGACTCTTCTTCAACTCGGTCCAATTCTTACCTTAGGCCTTCCGAAGTGTATTGAAGAACCACTTCTTCACACGGTTCGTCTTCCACCGGCTTTGGTGAAGAAAGATTACCAGAGACTTTATGATTTTTTCTACGAAGCATCTTCCGGATCAATCTTAGCTGAAGCGGTTAGACTCGGAGTTTCTAAAGAAGAAGCGGTTCATAATCTTATATTCGCAACTTGTTTTAATACATTTGGTGGAATGAAGATTTTGTTTCCGAATATGTTGAAGTGGATTGGACGAGCGGGGGTTAATCTTCATGCTAAGTTAGCGAGAGAGATTAGATCGGTTGTTAAATCGAACGGCGGTAAAGTGACGATGGCGGGCCTGGAGCAAATGCCGTTGGTGAAATCTGTGGTTTATGAGTCCTTTAGAATTGAGCCACCGGTGTCGTTGCAATACGGAAAAGCTAAGCATGATTTAGTGATTGAGAATCATGAGAATGCGTTTGAAGTGAAGGAAGGTGAAATGCTGTTTGGTTTTCAACCGTTTGCGACGAAGGATAGTAAGATATTTGATAGAGCAGAGGAGTTTGTTGCGGATAGGTTTATTGGTGAAGAGGGAGAGAAGCTGTTGAAGCATGTGCTATGGTCGAATGGTCCTGAAACGGAACAACCGACGGTTGGGAATAAGCAGTGTGCTGGGAAGGATTTTGTGGTGTTGTTTTCTAGGCTTTTGGTGGTGGAGTTGTTTCTGAGATATGATACTTTTGGGATTAATGTTGAAAAGGCCCCGATAGGATCTGCTATTACCTTTAGCTCTCTTAAGAGAGCAACCTATTAG 1707 0.4312 MASSSLTSVASPFLQTEFRSKRTAKFHTRCSISKCPFTPLSVAPLKASVSNTNTCPITTNSVSDTDTTPITTPVSSDTDTDTTQTPVQQEPLPQLETTKNLPLRRIPGDYGLPFVGPIKDRLDYFYNEGRDKFFRTRIHKYKSTVFRANMPPGPFISSNPNVIVLLDGKSFPILFDNSKIEKRDLFTGTFMPSLELTGGYRILSYLDPSEPKHDQLKRFLFFLLKFRSSHFIPEFRSSYTKLFDTLEKDLEKSGKAVFADVNDQEAFNYLSKAFFGVNPSETSLKTDGPSIVTKWTLLQLGPILTLGLPKCIEEPLLHTVRLPPALVKKDYQRLYDFFYEASSGSILAEAVRLGVSKEEAVHNLIFATCFNTFGGMKILFPNMLKWIGRAGVNLHAKLAREIRSVVKSNGGKVTMAGLEQMPLVKSVVYESFRIEPPVSLQYGKAKHDLVIENHENAFEVKEGEMLFGFQPFATKDSKIFDRAEEFVADRFIGEEGEKLLKHVLWSNGPETEQPTVGNKQCAGKDFVVLFSRLLVVELFLRYDTFGINVEKAPIGSAITFSSLKRATY 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00352 568 MobiDBLite consensus disorder prediction 58 87 - -
Vivi3g00352 568 Pfam Cytochrome P450 395 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00352 568 PRINTS E-class P450 group IV signature 421 437 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00352 568 PRINTS E-class P450 group IV signature 474 492 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00352 568 PRINTS E-class P450 group IV signature 521 539 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00352 568 Gene3D Cytochrome P450 101 568 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00352 568 CDD CYP74 135 561 - -
Vivi3g00352 568 SUPERFAMILY Cytochrome P450 101 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00352 568 FunFam Allene oxide synthase, chloroplastic 101 568 - -
Vivi3g00352 568 PANTHER CYTOCHROME P450 26 101 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00352 Vivi-Chr3 6277166 6279019 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00352 98 568 Cytochrome P450 AT5G42650 66.454 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00352 K01723 - gmx:100807192 733.021