Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00323 ATGCCGAATCCAGAGTCCTCCCGTCAATCCAATCGCCGTTCCAAAACTCGACCCTCGTCTTCCAAGCCTCGCCCCAAAGACAGAGTTCCGCTCACCAAGCTACTCCGAGTGGCGTCGGTTGCCGGTGGGATTCAGTTCGGATGGGCTTTGCAGTTGTCTCTTCTAACCCCCTATGTGCAGCAGCTCGGGATTCCGCATGCGTGGGCGAGTATTATATGGCTGTGTGGGCCGCTTTCCGGGCTTATTGTTCAGCCGTTGGTTGGGCATTTGAGTGATCGGTGTGCCAGTCGATTTGGGAGGAGGAGGCCGTTTATTTTAGGCGGAGCTATTTCGATTGCGTTGTCTGTGCTTATTATTGGTCATGCTGCGGATTTGGGATGGAGGTTTGGTGATACGAGTGATCATCGGCCTAGCGCGGTCGCGTTTTTCGTGTTCGGGTTTTGGATTTTGGATGTTGCTAATAATGTTACTCAAGGCCCTTGTAGAGCTTTGCTCGGTGATCTGACCGGTAAGGATCATCGAAGGACACGGGTCGCAAATGCTTATTTTTCCCTATTTATGGCTATTGGTAACGTTCTTGGATATGCAACTGGAGCATATAGTAGTTGGTACAAGGTCTTTCCTTTCACACTTACCCCTGCATGCAATATTAGCTGTGCAAATCTCAAGTCTGCTTTCTTTCTGGACATTGTTTTCATGATTGTCACCACCTATATCAGTATCACAGCAGCTAATGAAGTGCCTCTAGGATCAAGTGGGGCACCCGATGCGGAAGCAGCAGAGGAGTCCGGTGGTAGTGCGGAAGAAGCTTTTTTGTGGGAACTATTTGGGACATTCAAATATTTTTCAAAGCCTATATGGATAGTATTATCTGTTACTGCTCTAACATGGGTTGGGTGGTTTCCCTTTCTTCTATTTGATACTGATTGGATGGGCCGAGAAATTTATGGCGGTGAGCCAAATGAAGGCACTAATTATGATTCCGGAGTTAGAATGGGGGCACTTGGTTTATTGCTTAATTCAGTTGTTCTTGGAGTAACATCATTACTCATGGAGAAGCTATGCAGGAAGCGGGGGGCTGGATTTGTGTGGGGAATCGCAAATATCCTAATGGCTGTCTGCTTTGTAGCAATGCTTGTAGTAACCTATGTGGCAAAAAACATTGGTTATTTAGGCAAAGACCTACCACCCACTAGCATCGTGATAGGTGCACTGGCAATCTTTACCGTTCTCGGGTTTCCATTGGCTATCACTTACAGTGTTCCATATGCCTTAATTTCTACACATATTCAGCCATTGGGGCTCGGCCAAGGATTGTCAATGGGAGTCCTAAATCTTGCAATAGTGTTCCCACAGATGGTAGTGTCCTTAGGAAGTGGACCATGGGATCAGTTATTTGGCGGAGGAAACTCTCCGGCGTTTGCCGTGGCAGCTATTGCAGCTCTTGTCAGTGGAGTCTTAGCTGTCTTTGCTATTCCCCAAACTGGTTCTCAAAAGCCTAGAAACCCAGTATGA 1515 0.4733 MPNPESSRQSNRRSKTRPSSSKPRPKDRVPLTKLLRVASVAGGIQFGWALQLSLLTPYVQQLGIPHAWASIIWLCGPLSGLIVQPLVGHLSDRCASRFGRRRPFILGGAISIALSVLIIGHAADLGWRFGDTSDHRPSAVAFFVFGFWILDVANNVTQGPCRALLGDLTGKDHRRTRVANAYFSLFMAIGNVLGYATGAYSSWYKVFPFTLTPACNISCANLKSAFFLDIVFMIVTTYISITAANEVPLGSSGAPDAEAAEESGGSAEEAFLWELFGTFKYFSKPIWIVLSVTALTWVGWFPFLLFDTDWMGREIYGGEPNEGTNYDSGVRMGALGLLLNSVVLGVTSLLMEKLCRKRGAGFVWGIANILMAVCFVAMLVVTYVAKNIGYLGKDLPPTSIVIGALAIFTVLGFPLAITYSVPYALISTHIQPLGLGQGLSMGVLNLAIVFPQMVVSLGSGPWDQLFGGGNSPAFAVAAIAALVSGVLAVFAIPQTGSQKPRNPV 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00323 504 Pfam MFS/sugar transport protein 49 196 - -
Vivi3g00323 504 NCBIfam sucrose/proton symporter 29 495 IPR005989 GO:0005886|GO:0008515|GO:0015770
Vivi3g00323 504 PANTHER SUGAR TRANSPORTER 28 491 - -
Vivi3g00323 504 SUPERFAMILY MFS general substrate transporter 34 497 IPR036259 -
Vivi3g00323 504 MobiDBLite consensus disorder prediction 1 27 - -
Vivi3g00323 504 FunFam Sucrose transport protein 28 492 - -
Vivi3g00323 504 MobiDBLite consensus disorder prediction 1 16 - -
Vivi3g00323 504 Gene3D MFS general substrate transporter like domains 32 248 IPR036259 -
Vivi3g00323 504 Gene3D MFS general substrate transporter like domains 282 500 IPR036259 -
Vivi3g00323 504 CDD MFS_SLC45_SUC 34 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00323 Vivi-Chr3 5689695 5695975 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00323 11 500 Sucrose Transporter Gene Family AT1G09960 67.944 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00323 K15378 - gmx:100787939 809.29