Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00315 ATGGATGCCACACACAACATGTTTTGTAACAAAGATCTTGTTAACCCTCTAAACTCAATGGGCATGCAAGTTTCTTGTATTCTTGTTGTTTCACACTTCTTCAACGTTGTTCTTAGAACCGTTGGTCAACCTGGTCCCATTGCACAAATTCTGGCCGGGTTGGTGTTAGGTCCAATGTCACATGTTTCTTACATAAAAGAAACATTTTTCCCCGCGAATTCAATGAATTACTACGAAGTCGTTAGCTTCTTTTGTCGAATAAACTTCATGTTTTTATTCGGGTTAGAGATGAATTTCCAATACACAAAGCGTCATCTACGTTTAGTAACATTAGTAGCATGTGGTGGTGCAATAATGGGTGCAATATTTGGTTTATCCGTCTCATTTTATTTATATCAAGAGTTAGGTATAAATACCTCAATGATTTATTTTTGCACCATCATTATGTTAGTTGTAGCATACACAAGCTCCCCTATGGTCATCCGTTTGGCAGCCGATTTACGGTTCGCCGCGTCCGACGTAGGCCGGATCGCAGTGTCGGCCGCATTGATCACAGAAATGGTTTGTTTGTTGTTGTTCAACATAATGGTTAATTGGAAGCAACTAAATGATGTTCCTAGGGGTTTTTATTGTCTCATTATTACATTCCTAGTGACTCTCATGAATAGATACTTATCAATTTGGTTTAATGCAAGAAATAAGAACCAAAAATACTTACAAGCCCCTGAGCTATTGCTTATACTCTTTGTGCTTTTAACTACCTCAATGGTTATAGAAATTTGGGGGTATAATAGTATTATTCATTGTTTTTGCGTTGGATTGTTTTTTCCTAAAGAAGGAAAAACAGCTAGGACATTGCTTCATAAACTTGGTTATTCAATTTATAACTTTGTTCTTCCGGTGTATTTTGGGTACATGGGTTTACAATGTGACCTTATAAATGTGTTTAAGAGTTTGGATAACATAACAAATACTGCTATAATGATTTTGTTGAGCATTGGAAGCAAGCTTGGGGGGACTCTCTTGGTTTGTCGTTACCTTCATATTCCTACAAGTGAAGGGATTTTTCTTGGGTTTTTGATGAATACTAGAGGCTATGCTGATCTTCTTTTCATTGGTGCTGCTGCAAAACAACATATTGATGCAGAATCATACAATATGTTGCTAGTAGCAATAGTACTAAACACAGTAATATCAGGAATTATTGTGTCTTTTCTAGCAAGAGGAGAAGAGAAAATGTTTTCACACAATCACACAGCAATTGAGCCACAGAAATTGGAAGACGAACTTCGAATTTTAGCTTGCGTATACGATCCTCGCCAAGTATCCGCAATACTAGCAACTGTGCTAGCAATACACGGATCAAGAACATCGCCTTCAACCACTTACTTAATGCACTTAATCGAGCTCGTGAAGAAGATCAAGTCCAATTTATTGTACCATGAAAAAGAAAACGGTGACCTTAGCGACGATGATGACTATGGCGGAAACGATGTGGTTGAAATCAATAACTCCTTAGATGTATTCACAGCTGACACAAAGATTTTGGTTCATCAAAAAAGAGCAGTATCTTCTTTCCCAAGTTTGTATGAAGATGTCTGCAATGAAGCTGAAGATCTTCAAGTATCAATCATCCTTCTCCCTTTTCACAAGCATCAAAGAATTGATGGAAAATTAGAAAGTGGAAAAGAAGGTATAAGGATCACTAATCAAAAGGTTCTTAGACACGCGCCATGTTCTATCGGCGTCATCATCGAACGAGGCCTTACTAAAGTCCCCGGTTTCTCGCAGTTGATTGCGTCCGAAGGTACACAAAATGTTGCAACACTTTTCTTCGGAGGCCCAGACGATCGCGAGGCAATAGCTTGGAGCCTACGTATCTCAAAATGTCCTAAAGTCAACTTAACAATAATCCGATTCCTATTGTCTACGTCGTCCTCATCACATAACGAACATAATGATAACGGGGTACAATTCGACGAAAAGGAAATTCTTATGTCGTTGTCAGGAGAAGAGACGGTGAACGAGGTCGACAATACTTTTATGGTTGATTTCTATAATAGATATGTGACTTCAGGACAAATTGGATATGTTGAGAAGTTTGTGAAAGATGGAACACAAACTGTTGAGTCTTTGAAAGAGATTGGAGACATGTACTCTTTGTTTATAGTAGGGAGAGGTGGTAGAGGAAATAGTTCATTAACAATAGGTATGAGTGATTGGGAAGAGTGTCCTGAACTTGGAACAGTTGGTGATGTTTTGGCTTCTTCAGATTTTGATATTCATGGTTCTGTTTTGATAATTCAACAACATAGAGATGCTAAGAAGGGTTTAATTCAGGATTAA 2346 0.3802 MDATHNMFCNKDLVNPLNSMGMQVSCILVVSHFFNVVLRTVGQPGPIAQILAGLVLGPMSHVSYIKETFFPANSMNYYEVVSFFCRINFMFLFGLEMNFQYTKRHLRLVTLVACGGAIMGAIFGLSVSFYLYQELGINTSMIYFCTIIMLVVAYTSSPMVIRLAADLRFAASDVGRIAVSAALITEMVCLLLFNIMVNWKQLNDVPRGFYCLIITFLVTLMNRYLSIWFNARNKNQKYLQAPELLLILFVLLTTSMVIEIWGYNSIIHCFCVGLFFPKEGKTARTLLHKLGYSIYNFVLPVYFGYMGLQCDLINVFKSLDNITNTAIMILLSIGSKLGGTLLVCRYLHIPTSEGIFLGFLMNTRGYADLLFIGAAAKQHIDAESYNMLLVAIVLNTVISGIIVSFLARGEEKMFSHNHTAIEPQKLEDELRILACVYDPRQVSAILATVLAIHGSRTSPSTTYLMHLIELVKKIKSNLLYHEKENGDLSDDDDYGGNDVVEINNSLDVFTADTKILVHQKRAVSSFPSLYEDVCNEAEDLQVSIILLPFHKHQRIDGKLESGKEGIRITNQKVLRHAPCSIGVIIERGLTKVPGFSQLIASEGTQNVATLFFGGPDDREAIAWSLRISKCPKVNLTIIRFLLSTSSSSHNEHNDNGVQFDEKEILMSLSGEETVNEVDNTFMVDFYNRYVTSGQIGYVEKFVKDGTQTVESLKEIGDMYSLFIVGRGGRGNSSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLIIQQHRDAKKGLIQD 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00315 781 Gene3D - 19 415 IPR038770 -
Vivi3g00315 781 Pfam Sodium/hydrogen exchanger family 27 407 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vivi3g00315 781 PANTHER CATION/H + ANTIPORTER 14 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00315 Vivi-Chr3 5378653 5382004 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00315 12 781 Antiporter Super Family AT1G79400 38.896 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00315 K26731 - gmx:100804522 1295.8