Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00191 ATGAGTACTACTATTCAACAACAACCTCATAACTCAGAAACCACAACCATCTCAAACAATTCACCACAACCATCATCACCATCACAATCACAATCTCAAAAAATCAAACGCATTAGAGACACAAACACAAACACAAACACAAATAAGCATCCACTCTACCGCGGCGTCCGTATGCGAAACTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCGAAGAAGAAATCCCGAATATGGCTCGGCACATTTCCAACTCCTGAAATGGCAGCCCGGGCTCACGACGTAGCTGCTCTCAGCATCAAAGGAAATGCTGCCATTCTCAACTTCCCCGAGCTAGCAAACTCGCTCCCCCGGCCGGCTTCTGTCTCTCCCCGCGATGTCCAGGCCGCTGCTACAAAAGCCGCTCACATGGAGTTTCCTTCTTCGGCTGCCCCGTACGAATTGAGCGAGATTATCGAACTTCCTAGTCTCGGAAACAGCGGTGAGTTCGAGAAGGAGTTTGTGTTTATTGATTCTATCGACGCGTCGTGGATGTTTCAGCCTCCCTGCTTGCACACCATGGAAGATTTTCTTTGGAGTGAAGTTTATAGTAACTATGGCTAG 600 0.4883 MSTTIQQQPHNSETTTISNNSPQPSSPSQSQSQKIKRIRDTNTNTNTNKHPLYRGVRMRNWGKWVSEIREPKKKSRIWLGTFPTPEMAARAHDVAALSIKGNAAILNFPELANSLPRPASVSPRDVQAAATKAAHMEFPSSAAPYELSEIIELPSLGNSGEFEKEFVFIDSIDASWMFQPPCLHTMEDFLWSEVYSNYG 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00191 199 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 27 156 - -
Vivi3g00191 199 CDD AP2 51 111 IPR001471 GO:0003700|GO:0006355
Vivi3g00191 199 ProSiteProfiles AP2/ERF domain profile. 52 109 IPR001471 GO:0003700|GO:0006355
Vivi3g00191 199 MobiDBLite consensus disorder prediction 1 52 - -
Vivi3g00191 199 PRINTS Ethylene responsive element binding protein signature 53 64 IPR001471 GO:0003700|GO:0006355
Vivi3g00191 199 PRINTS Ethylene responsive element binding protein signature 75 91 IPR001471 GO:0003700|GO:0006355
Vivi3g00191 199 Gene3D AP2/ERF domain 52 110 IPR036955 GO:0003700|GO:0006355
Vivi3g00191 199 FunFam Ethylene-responsive transcription factor 2 51 110 - -
Vivi3g00191 199 Pfam AP2 domain 51 101 IPR001471 GO:0003700|GO:0006355
Vivi3g00191 199 SMART rav1_2 52 115 IPR001471 GO:0003700|GO:0006355
Vivi3g00191 199 MobiDBLite consensus disorder prediction 1 51 - -
Vivi3g00191 199 SUPERFAMILY DNA-binding domain 52 110 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00191 Vivi-Chr3 3702977 3703883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00191 11 199 AP2-EREBP Transcription Factor Family AT5G11590 51.351 1.01e-65 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Vivi3g00191 AP2 8.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00191 K09286 - gmx:100794316 214.157