Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00163 ATGGTTGAAGAAAATGATATAAGAAACTTCACTTTTTCATTCAGTTCAAGATTCTTAAGAGTTCCTTCAAATCTAAGTGAAGATCCAAATCTTGAGATTTTTATTCAAAGAGAACCTTCTCAAAGAAAGAGTAAAAAACAAGAACAAGAGATAGTTCTTCTTGATCATGAAGAAGGTGGTAGCAGTAATGTTACAAAGATGAAACATCATCAACAACAACAACCTTTGCATATGATTAATCATAGGATATTGATCTCTGATGCTGTTACAAGGAGTAGGTGGAGTGATCTCAACTCTTCTGATTTGTTATCATTGAAAAGTGAGATGCTTCATGATGTGTCAAGTGCAAGATTTTCTCCTGATGAGGATGAGAATTCCTTTACAGCATTGAATCCTGGTGAGAAGAGATCTATGTCTGATATTCCAAATGTTCCAAGGTTTGTGGAAGTTGGCAGCAGAAGAAGGAATGGAAATGATGAGAGAATGTGGAGGATTTGGTTGCCAATTGCTAGGAGAACAGTTCAATGGTTTGCAAGACAAGAAACAAACTCGGTTCAGTTGTTACAACATAAACATTTAGCATCAAATGTTTGA 594 0.3535 MVEENDIRNFTFSFSSRFLRVPSNLSEDPNLEIFIQREPSQRKSKKQEQEIVLLDHEEGGSSNVTKMKHHQQQQPLHMINHRILISDAVTRSRWSDLNSSDLLSLKSEMLHDVSSARFSPDEDENSFTALNPGEKRSMSDIPNVPRFVEVGSRRRNGNDERMWRIWLPIARRTVQWFARQETNSVQLLQHKHLASNV 197
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00163 197 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 52 182 - -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00163 13 181 C3H Transcription Factor Family AT2G20030 35.468 2.22e-22 91.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00163 K10664 - vvo:131656584 380.178