Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00160 ATGATCTCTTCCTTAATGTTACCATCTGCTACAACTTTAAAACCTTACTGTAATTGCAGCATCATTCCCTCATCATCATCTTCTTCTTCATCTTCAAGAAGACTCACTCTCTTTCATCTTCTCACCACCGGTGCCATTGTTCTCCCACCACAATCACAATTCTTCGGTGCAAAGCTATCACAAGCTAATGCTGCTCAAAAGCTTTTCAAATCAGACCAAGACCTGTTTGATTGGGTTCAAAATGACAATAGAAGATTCCTACATGTTGTTTACAGTGTTGCAGATTTGGACAAGACTATAAAATTCTACACTGAATGTCTTGGCATGAAGCTTTTGAGAAAACGCGATATACCCGAAGATAAATATTCGAATGCTTTTCTTGGTTATGGACCTGAAGATTCCAGTTTTACAGTTGAACTTACTTATAATTATGGTGTAGATAAGTATGATATTGGAACTGGTTTTGGTCATTTTGGTATTGTAGCTCAAGATATTGCGAAGAAGGTTGATATTGTAAAGGCAAAAGGGGGAAAGGTTATCAGGGAGTCGGGGCCTGTCAAAGGCGGCTCTATAGTTACTGCTTCTGTTGAAGATCCTAGTGGTTATAGGTTTGAGCTTTTGGAGAGAAGACTTACTCGCGAACCCTTGTGCCAAGTGATGCTTCGAGTAGGCGATCTAGATCGTGTCATAGCCTTCTATGAAAAAGCTGTTGGCATGAAACTTCTCCGCAAGATAGACAACCCTGAGGATAAGAACACAGTAGCCGTGTTGGGATATGGTCCTGAAGCTAATGGTCCAGTTCTAGAACTAACATATAACTACGGTATCACTAATTATGACAAAGGAAATGGTTATACACAGATCGCAATAGGCACGAACGATGTCTATAAGGCCGCAGAAGCAATCAAGTTATACGGAGGGAAGATTATCCGTGAACCTGGACCCTTACCAGGTATCAACACCAAGATTGTCGTTTGCTTAGATCCCGATGGTTGGAAATTGGTATTTGTTGATAATGTCGATTTTCTGAAGGAATTAGAGTGA 1044 0.4042 MISSLMLPSATTLKPYCNCSIIPSSSSSSSSSRRLTLFHLLTTGAIVLPPQSQFFGAKLSQANAAQKLFKSDQDLFDWVQNDNRRFLHVVYSVADLDKTIKFYTECLGMKLLRKRDIPEDKYSNAFLGYGPEDSSFTVELTYNYGVDKYDIGTGFGHFGIVAQDIAKKVDIVKAKGGKVIRESGPVKGGSIVTASVEDPSGYRFELLERRLTREPLCQVMLRVGDLDRVIAFYEKAVGMKLLRKIDNPEDKNTVAVLGYGPEANGPVLELTYNYGITNYDKGNGYTQIAIGTNDVYKAAEAIKLYGGKIIREPGPLPGINTKIVVCLDPDGWKLVFVDNVDFLKELE 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00160 347 NCBIfam lactoylglutathione lyase 86 210 IPR004361 GO:0004462|GO:0046872
Vivi3g00160 347 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 85 209 IPR037523 -
Vivi3g00160 347 Gene3D - 57 210 IPR029068 -
Vivi3g00160 347 PANTHER LACTOYLGLUTATHIONE LYASE 67 347 - -
Vivi3g00160 347 Gene3D - 212 347 IPR029068 -
Vivi3g00160 347 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 218 335 IPR004360 -
Vivi3g00160 347 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 86 206 IPR004360 -
Vivi3g00160 347 ProSitePatterns Glyoxalase I signature 1. 88 109 IPR018146 GO:0004462|GO:0046872
Vivi3g00160 347 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 215 339 IPR037523 -
Vivi3g00160 347 FunFam Lactoylglutathione lyase 212 347 - -
Vivi3g00160 347 CDD GlxI_Ni 87 207 - -
Vivi3g00160 347 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 216 339 IPR029068 -
Vivi3g00160 347 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 84 209 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00160 Vivi-Chr3 3042587 3044922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00160 216 338 Calmodulin-binding Proteins AT1G08110 27.027 1.47e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00160 K01759 - gmx:100810908 519.62