Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00159 ATGATCTCTTCCTTAATGTTACCATCTGCTACAACTTTAAAACCTTACTGTAATTGCAGCATCATTCCCTCATCATCATCTTCTTCTTCATCTTCAAGAAGACTCACTCTCTTTCATCTTCTCACCACCGGTGCCATTGTTTTCTGGTGCTGCTGCTGCATTTGGTTATTCCTTTCCTTACTAGTTCTCCCACCACAATCACAATTCTTCGGTGCAAAGCTATCACAAGCTAATGCTGCTCAAAAGCTTTTCAAATCAGACCAAGACCTGTTTGATTGGGTTCAAAATGACAATAGAAGATTCCTACATGTTGTTTACAGTGTTGCAGATTTGGACAAGACTATAAAATTCTACACTGAATGTCTTGGCATGAAGCTTTTGAGAAAACGCGATATACCCGAAGATAAATATTCGAATGCTTTTCTTGGTTATGGACCTGAAGATTCCAGTTTTACAGTTGAACTTACTTATAATTATGGTGTAGATAAGTATGATATTGGAACTGGTTTTGGTCATTTTGGTATTGTAGCTCAAGATATTGCGAAGAAGGTTGATATTGTAAAGGCAAAAGGGGGAAAGGTTATCAGGGAGTCGGGGCCTGTCAAAGGCGGCTCTATAGTTACTGCTTCTGTTGAAGATCCTAGTGGTTATAGGTTTGAGCTTTTGGAGAGAAGACTTACTCGCGAACCCTTGTGCCAAGTGATGCTTCGAGTAGGCGATCTAGATCGTGTCATAGCCTTCTATGAAAAAGCTGTTGGCATGAAACTTCTCCGCAAGATAGACAACCCTGAGGATAAGAACACAGTAGCCGTGTTGGGATATGGTCCTGAAGCTAATGGTCCAGTTCTAGAACTAACATATAACTACGGTATCACTAATTATGACAAAGGAAATGGTTATACACAGATCGCAATAGGCACGAACGATGTCTATAAGGCCGCAGAAGCAATCAAGTTATACGGAGGGAAGATTATCCGTGAACCTGGACCCTTACCAGGTATCAACACCAAGATTGTCGTTTGCTTAGATCCCGATGGTTGGAAATTGGTATTTGTTGATAATGTCGATTTTCTGAAGGAATTAGAGTGA 1089 0.405 MISSLMLPSATTLKPYCNCSIIPSSSSSSSSSRRLTLFHLLTTGAIVFWCCCCIWLFLSLLVLPPQSQFFGAKLSQANAAQKLFKSDQDLFDWVQNDNRRFLHVVYSVADLDKTIKFYTECLGMKLLRKRDIPEDKYSNAFLGYGPEDSSFTVELTYNYGVDKYDIGTGFGHFGIVAQDIAKKVDIVKAKGGKVIRESGPVKGGSIVTASVEDPSGYRFELLERRLTREPLCQVMLRVGDLDRVIAFYEKAVGMKLLRKIDNPEDKNTVAVLGYGPEANGPVLELTYNYGITNYDKGNGYTQIAIGTNDVYKAAEAIKLYGGKIIREPGPLPGINTKIVVCLDPDGWKLVFVDNVDFLKELE 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00159 362 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 233 350 IPR004360 -
Vivi3g00159 362 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 101 221 IPR004360 -
Vivi3g00159 362 ProSitePatterns Glyoxalase I signature 1. 103 124 IPR018146 GO:0004462|GO:0046872
Vivi3g00159 362 CDD GlxI_Ni 102 222 - -
Vivi3g00159 362 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 99 224 IPR029068 -
Vivi3g00159 362 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 230 354 IPR037523 -
Vivi3g00159 362 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 100 224 IPR037523 -
Vivi3g00159 362 FunFam Lactoylglutathione lyase 227 362 - -
Vivi3g00159 362 NCBIfam lactoylglutathione lyase 101 225 IPR004361 GO:0004462|GO:0046872
Vivi3g00159 362 Gene3D - 72 225 IPR029068 -
Vivi3g00159 362 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 231 354 IPR029068 -
Vivi3g00159 362 Gene3D - 227 362 IPR029068 -
Vivi3g00159 362 PANTHER LACTOYLGLUTATHIONE LYASE 82 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00159 Vivi-Chr3 3042587 3044923 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00159 231 353 Calmodulin-binding Proteins AT1G08110 27.027 1.53e-09 55.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00159 3 3042587 3044923 Vivi3g00159 3 3042587 3044923 ECH