Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00149 ATGAAAAGCCATCAACCCAAACACCTTAAAACTCAACTTTTCTCGTGCGGCTTCTTTCGACAGTGCGGCCAAACAGTCCTTAGTCCCACCGCCACAGGAACCATCCCACAACCACCACAACCACCACAGCCACCACCACTCCCTCTCACTCACACTCACACTTCAACAACATGCGAATCTTCAACTTCCTCTTCTTCTAACTCCGCCACCTCCCAAAGCTTCACACAATGGAGATTCTCTCTTCCCACCCCTACACCCCCACCTACACCAAACCCACCCCCTCCCGTTACTACCACTCATCATCACCTTCCTTTCCTCTCCACCATTCCCAATCTTCAAGAACTCTTCCATGTCTCCGACCTTCAACTCACCACTGACCTCAACGCTGCACTTCACCTTCTAGAACGTTCCCTCGTTCCCAACCCGCCTCAAGACCAACCACCATGTCCTCCCAATCTCATGCGCGCATTGATTCACAATCTACGCGAATCCAAACCCGCCACCAAGATTCTCTTCGCGCTTTGTCTCTCAGAAGCCAACCGTCGTGTCGCGGTTGAAGCCGGAGCAGTAGGCGCCGTCGTGGAGTCTGCTCCGGAGCTAGACGGTCCTCCTGCAGAAAGAGCTCTCGCTGCGTTGGAACTCATGTGCACCATACCGGAGGGTGCGGAGGAGGTGCGAGCTCACGCGCTTGCGGTTCCGGTCATGGTTACCGTAATGGGAAAAACGGGGGCGCGTGGGAAGGAGTATGCTATTGGAGTACTGGCTGTGATTTATGGCGGTGATATGGCGGATCAACAGACGGCACCGCCGGAGGAAGTGGCGCGTGCGGTGGAGTTGGCACTTCAAGGAGAGTGTAGCGCTAGAGGAAAGAGAAAAGGGGGACAGCTTTTGAAGACACTGCAACACCTCTCTAACCCCCACTCGCATGACACAAGTTGA 939 0.5463 MKSHQPKHLKTQLFSCGFFRQCGQTVLSPTATGTIPQPPQPPQPPPLPLTHTHTSTTCESSTSSSSNSATSQSFTQWRFSLPTPTPPPTPNPPPPVTTTHHHLPFLSTIPNLQELFHVSDLQLTTDLNAALHLLERSLVPNPPQDQPPCPPNLMRALIHNLRESKPATKILFALCLSEANRRVAVEAGAVGAVVESAPELDGPPAERALAALELMCTIPEGAEEVRAHALAVPVMVTVMGKTGARGKEYAIGVLAVIYGGDMADQQTAPPEEVARAVELALQGECSARGKRKGGQLLKTLQHLSNPHSHDTS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00149 312 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 308 - -
Vivi3g00149 312 MobiDBLite consensus disorder prediction 29 102 - -
Vivi3g00149 312 MobiDBLite consensus disorder prediction 34 49 - -
Vivi3g00149 312 SUPERFAMILY ARM repeat 109 258 IPR016024 -
Vivi3g00149 312 MobiDBLite consensus disorder prediction 81 99 - -
Vivi3g00149 312 MobiDBLite consensus disorder prediction 50 80 - -
Vivi3g00149 312 Gene3D - 107 309 IPR011989 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00149 152 310 U-box Gene Family AT1G49780 34.756 1.16e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00149 - - gmx:100814020 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00149 3 2740906 2742147 Vivi3g00149 3 2740906 2742147 ECH