Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00129 AAAAATATATACATTATTACCGCCTTCAAGTTCTACAAGAACCCATTCCCTCCTTCACCGCCCCAAACTCTTCTCAACTCTCTCTCTCTAACATTTTTTTCAGTGTCTCCAATCAGTATCTTCAAACTGGCGTTCGAGAATCAAGACACAGTTCGTGAAATCAAACCCAAGAATAGGAGAATCATGGGTGCTGGAGGACCTGATGATGAAGAAAATAGATGGCCTCCATGGTTGAAACCTCTGCTGAAAGAACGTTTCTTTGTTCAATGTAAGATGCACGCTGATTCTCATAAGAGTGAGTGTAACATGTACTGTTTGGATTGTATGAACGGTGCTCTTTGTTCTCTGTGTCTCAATTATCATAAAGATCATCGCGCTATTCAGATAAGGAGGTCTTCATACCATGATGTGATTAGGGTGAATGAGATTCAGAAGGTGTTGGATATTTCCGGGGTTCAAACATATATTATCAACAGTGCTAGGGTTGTGTTCTTGAATGAGAGGCCTCAGCCAAGGCCCGGCAAAGGCGTCACCAACACTTGCGAAGTCTGCGAGCGCAGCCTTCTCGACTCGTTTCGATTCTGTTCTCTTGGTTGCAAGATTGTTGGAACATCGACGAATTTCCAGAAGAAGAGCAAGTTAGCTTCCATGATATCAGACTCAGAGGATTCATACAGCAGCAGTTGCAGTCATGGAAAACTGAAGAACAACATCAAGGTGCAAAGCTTCACTCCTTCAACACCACCACCAACTTCAGTTAATTACAGAACAGCCAAAAGAAGAAAGGGAATTCCGCATCGTGCCCCAATGGGAGGACTAGTCTTGCAATACTAG 834 0.4329 KNIYIITAFKFYKNPFPPSPPQTLLNSLSLTFFSVSPISIFKLAFENQDTVREIKPKNRRIMGAGGPDDEENRWPPWLKPLLKERFFVQCKMHADSHKSECNMYCLDCMNGALCSLCLNYHKDHRAIQIRRSSYHDVIRVNEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSTNFQKKSKLASMISDSEDSYSSSCSHGKLKNNIKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVLQY 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00129 277 Pfam PLATZ transcription factor 130 201 IPR006734 -
Vivi3g00129 277 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 68 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00129 Vivi-Chr3 2338513 2340447 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vivi3g00129 PLATZ 3.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00129 - - vvo:131619063 494.197