Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00099 ATGTCAATGGGTTCTATCATGGAAAGGGAACGAACTCGGAAACGACCTCGTCTCGAATGGGATGTAGCTCCTCAACCTTCATTTCCGCAGTCACAGAGAATTTGCACGGTGGTTGGTGATGAAGGAATCGAGAAAAAGCATGCATCGCCTCCGAGAAGAAACGAAGGTCGGGATGGACATTATGTTTTCAATCTCGGCGAAAATCTCACTCCTAGATATAAAATTCTCGGCAAAATGGGTGAAGGCACGTTTGGTCGAGTTTTGGAATGTTGGGATCGTCAAACAAGAGATTATGTAGCTATCAAGGTGATTAGAAGCATCCAGAAGTATCGCGACGCGGCAATGATCGAGGTTGATGTGCTGGAGCGTCTTGTGAAGAGTGATGTGGGATGCTCACGTTGTGTGCAGATGCAGAATTGGTTTGATTACCGGAATCACATATGCATTGTCTTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTAAAGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGTGAATTTGGACGACAGCTTTTGGAATCTGTAGCATATATGCATGAACTACGGCTAATCCACACCGACCTGAAGCCAGAAAATATACTTCTTATTTCTTCTGACTGTGTAAAGCTTCCTAGTTGTAAGAGGGTTTTCTCAGATGAAACACAATTCAGGTGCTTGCCTAAGTCTAGTGCTATTAAGCTGATTGATTTTGGTAGTACTGCATCTGCAAATCAGAGCCATAGCTCCATTGTTTCTACAAGGCATTACAGAGCCCCTGAGGTTATCTTAGGTCTAGGGTGGTCAACGCCGTGTGATTTGTGGAGTGTTGGATGTATTCTCTACGAATTATGCACGGTTGGTCTTCCATCTGTCAAGATGGAGAAGCATTGTTTCAGACACATGAAAATTTGGAGCACCTTGCAATGA 939 0.4356 MSMGSIMERERTRKRPRLEWDVAPQPSFPQSQRICTVVGDEGIEKKHASPPRRNEGRDGHYVFNLGENLTPRYKILGKMGEGTFGRVLECWDRQTRDYVAIKVIRSIQKYRDAAMIEVDVLERLVKSDVGCSRCVQMQNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHELRLIHTDLKPENILLISSDCVKLPSCKRVFSDETQFRCLPKSSAIKLIDFGSTASANQSHSSIVSTRHYRAPEVILGLGWSTPCDLWSVGCILYELCTVGLPSVKMEKHCFRHMKIWSTLQ 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00099 312 ProSiteProfiles Protein kinase domain profile. 73 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g00099 312 Gene3D Transferase(Phosphotransferase) domain 1 127 289 - -
Vivi3g00099 312 SMART serkin_6 73 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g00099 312 SUPERFAMILY Protein kinase-like (PK-like) 60 298 IPR011009 -
Vivi3g00099 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Vivi3g00099 312 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 33 289 - -
Vivi3g00099 312 FunFam Serine/threonine-protein kinase AFC2 60 153 - -
Vivi3g00099 312 Pfam Protein kinase domain 73 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g00099 312 Gene3D Phosphorylase Kinase; domain 1 60 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00099 Vivi-Chr3 1674448 1677441 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00099 63 289 MAP Kinase Kinase Kinase AT3G13530 30.769 1.90e-26 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Vivi3g00099 Pkinase 1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00099 K08287 - gmx:100782453 498.049