Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00037 ATGGCAGCAACGGAATTGGATCTCGACGAGTTTCTCAATCTCGATTACGAACTTCGGTATCCGAGTCTTGCCGATACGGAGGCGTTCATGAACGCCGCTTTCCAAACTCTTTTACCGGATGTGGTAGCTTCATTTTCAACTTGTGGTGGAGTTGGAGACTCTCAAAACCTTACTCCCAAACATTCCACCATCAGTGCTACTATTGATTCTCAATCATCCCTTTATGGCACTGTTGGAAGCCCAGTTTCAGCCAATAAACCAACCAGCAGAGAGAACCATACCAAAGGGACAACAAGTGGCTCATCTGATCCTTCTGATGAAGATGATGAACAAAGCACTAATCCACGTGATATCAAACGCATTCGGAGAATGGATTCTAATCGCGAATCAGCCAAAAGATCAAGGCAAAGAAAACAAGCTCATTTGTCTGAACTTGAGTCTCAGGTTGAAAAACTGAAACTGGAAAAGGTAACCCTATACAAACAGTTTACAAATGCTAGCCAACAATTTCATGAGGCTGATATAAATAACAGAGTGCTAAAATCAGATGTTGAAGCTTTAAGAGCTAAGGTGAAGTTAGCCGAGGATATGGTCACTAGAAGCTCTTTCACCCCATCATTAAACAATCAGTTTTTTCCGAATCAATGTCAAATAAGCACACCATCGCAACTCAATGTGCTGCCATCTTTACGCCGCGTGCCACATGTTTCACCAACCATCAATGTCCAACAGGGAAATGGTGCTTCGTACGGAGGCGTCGCGGCCGGTGAACACTATTCAAATCTTCTTGGGTTTGGAAACTTGGACATGAGTAATTACAATGACATCATTGACAATGGAGTCTTAGGCAATGCTATGAGTTGTGTAACTACTACCTGGCCCTAA 885 0.4316 MAATELDLDEFLNLDYELRYPSLADTEAFMNAAFQTLLPDVVASFSTCGGVGDSQNLTPKHSTISATIDSQSSLYGTVGSPVSANKPTSRENHTKGTTSGSSDPSDEDDEQSTNPRDIKRIRRMDSNRESAKRSRQRKQAHLSELESQVEKLKLEKVTLYKQFTNASQQFHEADINNRVLKSDVEALRAKVKLAEDMVTRSSFTPSLNNQFFPNQCQISTPSQLNVLPSLRRVPHVSPTINVQQGNGASYGGVAAGEHYSNLLGFGNLDMSNYNDIIDNGVLGNAMSCVTTTWP 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00037 294 Coils Coil 128 162 - -
Vivi3g00037 294 MobiDBLite consensus disorder prediction 109 145 - -
Vivi3g00037 294 FunFam BZIP transcription factor 117 168 - -
Vivi3g00037 294 Gene3D - 118 174 - -
Vivi3g00037 294 MobiDBLite consensus disorder prediction 75 101 - -
Vivi3g00037 294 PANTHER BASIC LEUCINE ZIPPER 63 53 246 - -
Vivi3g00037 294 SMART brlzneu 115 179 IPR004827 GO:0003700|GO:0006355
Vivi3g00037 294 SUPERFAMILY Leucine zipper domain 118 170 IPR046347 GO:0003700|GO:0006355
Vivi3g00037 294 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 117 169 IPR004827 GO:0003700|GO:0006355
Vivi3g00037 294 Pfam bZIP transcription factor 116 165 IPR004827 GO:0003700|GO:0006355
Vivi3g00037 294 Coils Coil 177 197 - -
Vivi3g00037 294 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 122 137 IPR004827 GO:0003700|GO:0006355
Vivi3g00037 294 CDD bZIP_plant_GBF1 120 171 IPR045314 GO:0003700|GO:0006355
Vivi3g00037 294 MobiDBLite consensus disorder prediction 75 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00037 Vivi-Chr3 506895 510499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00037 69 294 bZIP Transcription Factor Family AT5G24800 45.570 3.20e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi3g00037 bZIP_1 3.4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00037 K25784 - gmx:780555 317.775