Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00001 ATGGCCATTAGAACAACAAAACCAACCAAACTCTCTCAAAAAACAGTCCTCAAGCAAATCCTAAAAAGATGTTCAAGCCTAACCAAGAAAAACGGCTACGATCAAGACGAAGATGACGTCCAAGATCTTCCTCTTGATGTACCAAAAGGCCACTTCGCAGTTTACGTCGGAGAAAACAGAAGCAGATACATTGTACCAATCACAGTCCTAACTCACCCTCAGTTTCAGTCCCTCCTTCGACAAGCCGAAGAAGAGTTCGGCTTCGATCATCACACCGGCCTCACAATTCCTTGCCACGAAGTTGTTTTTCGCTCGTTAACATCAATCATGCTCAGATCATAA 342 0.4386 MAIRTTKPTKLSQKTVLKQILKRCSSLTKKNGYDQDEDDVQDLPLDVPKGHFAVYVGENRSRYIVPITVLTHPQFQSLLRQAEEEFGFDHHTGLTIPCHEVVFRSLTSIMLRS 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00001 113 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 45 109 IPR003676 GO:0009733
Vivi3g00001 113 Pfam Auxin responsive protein 22 109 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00001 Vivi-Chr3 13381 14051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00001 27 110 Calmodulin-binding Proteins AT5G20810 50.000 6.09e-21 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00001 K14488 - gmx:100805634 166.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00001 3 13381 14051 Vivi3g00001 3 13381 14051 ECH