Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi39g00007 ATGCAGGTCACTCTTTCACCTCTCACCCCTTCCCTCTCTCTCTACAAATCTCGCTCTTCTCTCTCCTCTCTTCCCTCATTCAATCCCATTCTCAACCCTTCTATCTCTTCTTCTTCCTCTTCCTTCCCGTCATGCACACCAATCGTTTCTTCTTCTTTTTCTTCCAAATTCATCTCCCTGACACCCCTCCATTCCTCCAACAACAACACCTTTCACACCAAAGCAAGCGTCACCGCCGCCGCAGACTCCTCCTCCTCCTCCTCCAGCAGCAGCCTCTTCAAAACTCTAGAGCTCGGCGTCCTCTTTTGTCTCTGGTTCTCCTTCAACATATACTTCAATATCTACAACAAACAGGTCTTGAAGGTTTACCATTTACCTGTAACTATCACGGCTTTTCAATTTGCCATTGGAACACTCCTTGTAACATTCATGTGGGGTCTTAACCTATATAAAAGACCAAAAATCACTTCTTCACAGCTTTTAGCAATATTTCCATTGGCTTTGGTACATACATTAGGGAACCTTTTCACAAACATGAGCCTTGGAAAAGTTGCTGTTTCTTTTACTCATACTGTCAAATCAATGGAGCCTTTCTTTTCTGTCCTTATGTCTTCTATGTTCCTTGGAGAGATGCCTACAGCATGGGTGGTTGCTTCCCTTGTGCCTATTGCAGGTGGAGTGGCGCTGGCGTCTGCTACAGAGGCCTCGTTCAATTGGATTGGGTTTTTGAGTGCTATGGCTTCCAATTTGACAAATCAATCTCGTAATGTTCTTAGCAAAAAACTCATGGTTAGCAAGGAGGAATCCATGGACAACATAACACTCTTCTCAATAATAACAGTCATGTCGTTCTTCCTATCAGTACCTCTAACTATCTTCATGGAGGGTGTCAAATTTACCCCTGCTTACCTGCAATCCGCAGGATTAGATGTTCAACAAGTATATATTAGATCTCTTCTCGCTGCACTGTGTTTCCACGCGTATCAGCAAGTTTCTTATATGATACTGGAGAGAGTATCACCTGTTACTCATTCAGTAGCAAACTGCGTGAAGCGAGTGATTGTAATTGTGAGCTCTGTCATTTTTTTCCAAACACCAGTCTCACCGATTAACGCATTAGGAACTGGTATAGCTCTTTCTGGTGTTTTTCTATATTCCAGGGTGAAGGGAATTAAGCCAAAGACAGAATAA 1191 0.4307 MQVTLSPLTPSLSLYKSRSSLSSLPSFNPILNPSISSSSSSFPSCTPIVSSSFSSKFISLTPLHSSNNNTFHTKASVTAAADSSSSSSSSSLFKTLELGVLFCLWFSFNIYFNIYNKQVLKVYHLPVTITAFQFAIGTLLVTFMWGLNLYKRPKITSSQLLAIFPLALVHTLGNLFTNMSLGKVAVSFTHTVKSMEPFFSVLMSSMFLGEMPTAWVVASLVPIAGGVALASATEASFNWIGFLSAMASNLTNQSRNVLSKKLMVSKEESMDNITLFSIITVMSFFLSVPLTIFMEGVKFTPAYLQSAGLDVQQVYIRSLLAALCFHAYQQVSYMILERVSPVTHSVANCVKRVIVIVSSVIFFQTPVSPINALGTGIALSGVFLYSRVKGIKPKTE 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi39g00007 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 310 388 - -
Vivi39g00007 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 143 231 - -
Vivi39g00007 396 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 96 394 IPR004696 GO:0016020|GO:0022857|GO:0055085
Vivi39g00007 396 PANTHER SOLUTE CARRIER FAMILY 35 98 390 - -
Vivi39g00007 396 Pfam Triose-phosphate Transporter family 97 386 IPR004853 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi39g00007 64 396 Antiporters AT5G33320 71.856 2.51e-171 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi39g00007 K15283 - jre:109004219 505.753