Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi397g00005 ATGAGTGCCAGGACATCCACCCCAATCAGCATATGTGAAGGAAACACGTTTCTTGATGGAAGAAGATGGATATGTGTTTCATTGCAAGCGAGCATTCATGTGAAGACACACTTGCTAAACAACATAGTAGATGATAGGATGGGTAAAGATGAGATACTGAAAAGGGCTGGGATATCAAATGAAGAAGGACATGAATGCGACAACACTTTAATAAATGATTCTCCTTTACGTATGCCGGATGGTTCACGTTCCTTGGATGAAAACTTTGAGTATTGTGTAAAACTAATCCGTTGGCTAGAGTGTGAGGGTCACATCAAACAGGAGTTTAGGTTAAAATTGCTAACATGGTTTAGTTTGAGATTAATAGATCAGGAACGCAGGGTGGTAAATACCTACATTCAAACTCTGATGGACGATCCAAGTAGTTTGGCAGGGCAACTGGTTGACTCTTTTTCTGATATTGTATCCAACAAGAGGCCAAGAAATGGATTCACTAGTAAAGATGGGGCATCAAAATAA 519 0.3988 MSARTSTPISICEGNTFLDGRRWICVSLQASIHVKTHLLNNIVDDRMGKDEILKRAGISNEEGHECDNTLINDSPLRMPDGSRSLDENFEYCVKLIRWLECEGHIKQEFRLKLLTWFSLRLIDQERRVVNTYIQTLMDDPSSLAGQLVDSFSDIVSNKRPRNGFTSKDGASK 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi397g00005 172 PANTHER VIN3-LIKE PROTEIN 2-RELATED 58 167 IPR044514 GO:0010048|GO:0040029
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi397g00005 54 163 PHD Gene Family AT3G24440 53.982 1.69e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi397g00005 - - vvo:131630647 352.443