Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi390g00018 ATGGACGCGCGTCGGGGCTCACGCGCCGTCGTAGACCCTAAAATTCGCATGGTCGGTTTCTTCGCTCCTCCCGCTCCGGTTCAATTCGAGTTCTCTCCTTCCGCCAATTCTCTCTCTCCGGTCATGATCCCTCCGCCACTTCATTCATCGGAAAATCTCGAACTCTGTTCTCAACCTTCCGTCGTCTCTTCTCCTTCCTGCGATGAAGCTATTGCCGTCTCCAGGAGCCAGAATAGCTGCTCCGAAGAGATGTTTCCTGCTTCGATGTCTCTCTCTCCGTCTCCGGTGGCTTCTACCGTACCTCGTGGTGGATTGGATTCGAAGACTGTGAAGAGCGGTAGCGGAATTCCGATGTGTAATTTGACTACGGTTTCTGTGGTCAATGCTGATTCGTTTGCGATTGACGAAAGAGAGAAGCCGATCAAAGGAGGAGGATCTGCAGTGGAAGTTAAAGACGAAGCTGTGAATTCAAAACAGAAGAAAGATAAGTCCTCAAAAGCTGAAAGACGTGCTCTTCAAGAAGCTCAGCGAGCAGAAAAAGCTGCTGCAAAAGCTGAAGGAAATACGGCATCTAGAACTGCAACTTCAGCGAATGTAAAATCAGCTAAAGCTGCAAAGCCCCCACACAAAGCTGTTAATACGTCTGCTGCAGCTTCTGAGAAAAAGGGTGGTGATCGGCCATCAGAGAAGGATAGGAAAAAAGATGTTCCTCACCCACGCCTGCAATATGATGATAAGAGCAGAGTGGAGAAAGCTAAACGCCGTGCTGTGGTAAACCAAACTGAATCCAGGAACAGAGTTGAACTGTTTAGACATTTGCCACAGTATGAACATGGGAGTCAGCTTCCTGATCTTGAGGCAAAGTTTTTCCAGCTTGGTCCTGTGCATCCATCAGTTTATAAGGTGGGTTTGCAGTATCTTTCTGGAGATATATCTGGTGGCAATGCTCGTTGTATTGCTATGCTTCAAGCATTCCAGGATGCCATCAAAGACTACACAGTTCCACTTGGGAAGACTCTAGTGAGAGACTTGACAGCAAAAATTAGTAGCTATGTTTCATTCCTTATTGAGTGTCGACCTCTTTCAGTCAGTATGGGAAATGCAATTAGATTTCTCAAAAGTCGAATTTCACAGCTACCTCGAACACAGTCTGAGTCAGAATCAAAAACTTCTCTTCAATCAGATATTGAGCGTTTTATATATGAGAAGATTATACTTGCTGACAAGATGATAGTAAAGCATGCTGTCACAAAAATAAGAGATGGTGATGTTCTTCTTACTTATGGTTCATCGTCAGCAGTTGAAATGATACTGTTACATGCACATAAATTAGGGAAACAGTTTCGAGTTGTAGTAGTAGACTCTCGTCCAAGTCATAGAGGGAAACTTCTGCTTCGTAGACTAGTGGAGGAAGGTCTTAATTGTACATACACTCATATCAATGCTGTTTCCTACATAATGCATGAGGTTACTCGAGTTTTTCTAGGCGCTTCATCAGTGTTGTCTAATGGAACAGTTTATTCAGGAGTTGGAACTGCATGTGTTGCAATGATCGCTCATGAATTCCATGTCCCTGTTATAGTTTGTTGTGAAGCTTTTAAATTTCATGAAAGGGTACAACTTGACTCAATATGCTCAAATGAACTTGGTGATCCAGATCTCGTTTCAAAGGTTTCGGGTAGACGGGATATTAACCACTTGGATGCTTGGGCCAATACTGAAAATCTGCAACTTCTAAATCTGATCTATGATGCCACACCTTCAGATTATGTTTCAATGATTGTCACAGATTATGGCATGATCCCCCCAACAAGTGTTCCTGTCGTTGTAAGGGAATATAACAGAGAACATGTGTGGATATAA 1863 0.4364 MDARRGSRAVVDPKIRMVGFFAPPAPVQFEFSPSANSLSPVMIPPPLHSSENLELCSQPSVVSSPSCDEAIAVSRSQNSCSEEMFPASMSLSPSPVASTVPRGGLDSKTVKSGSGIPMCNLTTVSVVNADSFAIDEREKPIKGGGSAVEVKDEAVNSKQKKDKSSKAERRALQEAQRAEKAAAKAEGNTASRTATSANVKSAKAAKPPHKAVNTSAAASEKKGGDRPSEKDRKKDVPHPRLQYDDKSRVEKAKRRAVVNQTESRNRVELFRHLPQYEHGSQLPDLEAKFFQLGPVHPSVYKVGLQYLSGDISGGNARCIAMLQAFQDAIKDYTVPLGKTLVRDLTAKISSYVSFLIECRPLSVSMGNAIRFLKSRISQLPRTQSESESKTSLQSDIERFIYEKIILADKMIVKHAVTKIRDGDVLLTYGSSSAVEMILLHAHKLGKQFRVVVVDSRPSHRGKLLLRRLVEEGLNCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSGVGTACVAMIAHEFHVPVIVCCEAFKFHERVQLDSICSNELGDPDLVSKVSGRRDINHLDAWANTENLQLLNLIYDATPSDYVSMIVTDYGMIPPTSVPVVVREYNREHVWI 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi390g00018 620 Pfam Initiation factor 2 subunit family 311 603 IPR000649 GO:0044237
Vivi390g00018 620 MobiDBLite consensus disorder prediction 153 181 - -
Vivi390g00018 620 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 33 617 - -
Vivi390g00018 620 Coils Coil 168 188 - -
Vivi390g00018 620 MobiDBLite consensus disorder prediction 142 260 - -
Vivi390g00018 620 MobiDBLite consensus disorder prediction 222 260 - -
Vivi390g00018 620 Gene3D - 407 613 IPR042529 -
Vivi390g00018 620 SUPERFAMILY NagB/RpiA/CoA transferase-like 295 613 IPR037171 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi390g00018 1 620 Eukaryotic Initiation Factors Gene Family AT5G38640 61.912 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi390g00018 K03680 - gmx:100785938 924.85