Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi390g00016 ATGTTTCCTTCTACTTATTGCTCTTTAGGTTCTTACCCTAGTTATAATCCTAATTCATCTTCTTCTTCATCTTCACATTCATACCCTCCTTTTACTTACCTTACCCCTGATCAACAAAATGCTTCTTCAAATAACAACAACAACAATATCAACACTTTTCTTCATGATCCAACTATTTCTGTTCCATACACACAAACTTCACATCATCATCATCATGTTCCAATGAATCCTGAAACTCTAACAAATTGGGCTATTGCTGATTATGCTGCAATGTTGAAACAAGATCTAAGTGGTTCTTCTTCTCATTACAACTTCTCAAATTTGCTTGCCAAAAAGCCGGTGAAGAAGCCGGCGAAGAAAGACCGGCACAGCAAGATTCATACATCTCAAGGTTTGAGAGACAGAAGGGTGAGACTCTCCATCGAGATAGCGCGGAAGTTCTTCGATCTTCAAGACATGTTAGGGTTTGACAAAGCAAGCAACACACTTGAGTGGCTTTTCAACAAATCAAAAGAAGCAATTGAAGAGTTAACTAGAAGCAAAAACAATATAGCTTCCGGTGAGGATGGTGTTGATGATCATAGCTTCTCTTCTTCTTCGTCCGACGGAGAAGAAGACGAAGCGAGAAAAATGAAAAGGGCACAGAAAGAATCCTCAAGGATGAAAGACTCAAGAGAAAAAGCAAGAGCAAGAGCAAGAGAAAGAACAAGTGAAATGAAGATTCAAGATTTGAAGGAAAAGTACCCAGAAACTGAGCATAATCAACAACAAACTCTTCATCAATTGATGCCGAACGACGAGGAAAATTCGAAACTAGTTCAAAGAGATGATATCTTTAACTTCATAGAAGAATCAATTGTGATTAAGAGAAAGTTGAAGAAATCTTCTTCACATCATCATCAACAAAACTCTAATTTGATGCCTAAGGAAGTAAATTTTGATCACAATGACTCTCCAATGTTAACACCAAATTGGGATACTAATAATAATAATAACAATGCTGCTGCAAATGGAAGATCCAACTTTTCTACAATATCAAGAATGAATCTATCATCAGGGCTTCAGATCTTTGGAAAATCATGGGAAGAATGCAATAACAGTCAAAATAGATATTAG 1116 0.3665 MFPSTYCSLGSYPSYNPNSSSSSSSHSYPPFTYLTPDQQNASSNNNNNNINTFLHDPTISVPYTQTSHHHHHVPMNPETLTNWAIADYAAMLKQDLSGSSSHYNFSNLLAKKPVKKPAKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKEAIEELTRSKNNIASGEDGVDDHSFSSSSSDGEEDEARKMKRAQKESSRMKDSREKARARARERTSEMKIQDLKEKYPETEHNQQQTLHQLMPNDEENSKLVQRDDIFNFIEESIVIKRKLKKSSSHHHQQNSNLMPKEVNFDHNDSPMLTPNWDTNNNNNNAAANGRSNFSTISRMNLSSGLQIFGKSWEECNNSQNRY 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi390g00016 371 Pfam TCP family transcription factor 118 240 IPR017887 -
Vivi390g00016 371 MobiDBLite consensus disorder prediction 184 242 - -
Vivi390g00016 371 MobiDBLite consensus disorder prediction 198 242 - -
Vivi390g00016 371 ProSiteProfiles TCP domain profile. 119 177 IPR017887 -
Vivi390g00016 371 ProSiteProfiles R domain profile. 222 239 IPR017888 -
Vivi390g00016 371 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 27 341 IPR005333 GO:0003700
Vivi390g00016 371 MobiDBLite consensus disorder prediction 16 51 - -
Vivi390g00016 371 Coils Coil 211 247 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi390g00016 71 243 TCP Transcription Factor Family AT1G67260 40.704 1.53e-32 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vivi390g00016 TCP 7.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi390g00016 - - cam:101489716 402.519