Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi390g00015 ATGTTTCCTTCTACTTATTGCTCTTTAGGTTCTTACCCTAGTTATAATCCTAATTCATCTTCTTCTTCATCTTCACATTCATACCCTCCTTTTACTTACCTTACCCCTGATCAACAAAATGCTTCTTCAAACAACAATACAAACAACATCAACACTTTTCTTCATGATCCAACTATTTCTATTCCATACACACAAACTTCACATCATCATCATCATGTTCCAATGAATCCTGAAACTCTAACAAATTGGGCTATTGCTGATTATGCTGCAATGTTGAAACAAGATCTAACTGGTTCTTCTTCTCATTACAACTTCTCGAATTTGCTTGCCAAGAAGCCGGTGAAGAAACCGGCGAAGAAAGACCGGCACAGCAAGATTCATACATCTCAAGGTTTGAGAGACAGAAGGGTGAGACTCTCGATCGAGATAGCGCGGAAGTTCTTCGATCTTCAAGACATGTTAGGGTTTGACAAAGCTAGCAACACACTGGAGTGGCTTTTCAACAAATCAAAAGAAGCAATTGAAGAGTTAACTAGAAGCAAAAACAATATAGCTTCTGGTGAGGATGGTGTTGATGATCATAGCTTCTCTTCTTCTTCGTCCGACGGAGAAGAAGGCGAAGCGAGAAAAATGAAAAGGGCACAGAAGGAATCTTCAAAGATGAAAGACTCAAGAGAAAAAGCAAGAGCAAGAGCAAGAGAAAGAACAAGTGAAATGAAGATTCAAGATTTGAAGGAAAAGTACCCAGAAACTGAGCATAATCAACAACAAATTCTTCATCAATTGATGCCGAACGACGAGGAAAATTCGAAACTAGTTCAAAGAGATGATATCTTTAACTTCATAGAGGAATCAATTGTGATTAAGAGAAAGTTGAAGAAATCTTCTTCACATCATCATCATCAACAAAACACTAATTTGATGCCTAAGGAAGCATGTTTTGATCACAATGACTCTCCAATGTTAACACAAAATTGGGATAATAATAATAATAACAACAATGCTGCTGGAAATGGAAGATCAAACTTTTCTGCAATATCAAGAATGAATCTATCATCAGGGCTTCAAATCTTTGGAAAATCATGGGAAGAATGCAATAACAGTCAAAATAGATATTAG 1119 0.3673 MFPSTYCSLGSYPSYNPNSSSSSSSHSYPPFTYLTPDQQNASSNNNTNNINTFLHDPTISIPYTQTSHHHHHVPMNPETLTNWAIADYAAMLKQDLTGSSSHYNFSNLLAKKPVKKPAKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKEAIEELTRSKNNIASGEDGVDDHSFSSSSSDGEEGEARKMKRAQKESSKMKDSREKARARARERTSEMKIQDLKEKYPETEHNQQQILHQLMPNDEENSKLVQRDDIFNFIEESIVIKRKLKKSSSHHHHQQNTNLMPKEACFDHNDSPMLTQNWDNNNNNNNAAGNGRSNFSAISRMNLSSGLQIFGKSWEECNNSQNRY 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi390g00015 372 Pfam TCP family transcription factor 118 240 IPR017887 -
Vivi390g00015 372 MobiDBLite consensus disorder prediction 198 240 - -
Vivi390g00015 372 MobiDBLite consensus disorder prediction 16 50 - -
Vivi390g00015 372 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 25 337 IPR005333 GO:0003700
Vivi390g00015 372 ProSiteProfiles TCP domain profile. 119 177 IPR017887 -
Vivi390g00015 372 ProSiteProfiles R domain profile. 222 239 IPR017888 -
Vivi390g00015 372 MobiDBLite consensus disorder prediction 184 240 - -
Vivi390g00015 372 Coils Coil 211 247 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi390g00015 71 333 TCP Transcription Factor Family AT1G67260 36.577 1.26e-34 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vivi390g00015 TCP 5.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi390g00015 - - cam:101489716 399.438