Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi390g00002 ATGGGATTGATTTGTGGTTGTGACTTTGTTGGTTGTGTTTTGATGTTTAGGAAAAGACAAACCCTTTTTTCTCTTTCAAATAGGTTGTTGGTGTTTCAGCTTCTTGTGCTGTTCTTGTTTTGTTTGCATCATGATAATAGAGTGCAATGTCATGGGAGATTGAGTAAACATGTATCTTATGAGTCTCGATCGGGGTCGGGGTCGGAATACAAGGATGATTCTAAGAAGATTATTGTTAGTGTAGTTTTAGGAGTGATCACTGGATTAATTGGTTCGATTCTGTTTGCGTTTGTGATTCGTTGTGTCGTTCGGTATCTGAATAGAACGCCTATCCTTAAAGGACCGGTGATATTCTCGCCGAAGATTGCCTCGAAGACACTCCAATTAGCTTTGTCGAAAGAAAACCATTTGCTCGGTTCGAGTGCGAATGGGAAGTACTACAAAACTGTTCTTGAGAATGGTCTCATAATTGCGGTGAAAAAGCTTACACCGTTCGAGAGCAATTCGCAAGAGAGTAGGAGAAAATCGGTGAAGAGGAAGATACAGATGGAGCTAGAGCTTCTTGCAAGCTTGAGACATAGGAATTTGATGAGTTTGAGGGCTTACGTTCGCGGAAACGATGGATTCTCGTTGGTTTATGATTATGTGTCGACCGGGAGTCTCGCGGATGTGATGAATAGGGTTAGGGAAAATGAGTTGCAGATTGGTTGGGAAGTTAGGTTGAGGATTGCTGTTGGTGTGGTGAAGGGTCTTCAATATCTTCATTACACTTGTGTGCCTCAGATTTTGCATTTCAATTTGAAGCCTACAAATGTGATGTTGGATGCTGAGTTTGAACCTAGATTGGCTGATTATGGTTTGGCTAAACTTCTACCAAACTTAGATAGAGGGAATTCTCTCAACACCCCTCCCGAATGTTTCCTGAATTCCAGCAGGTACACAGAAAAAAGTGACATATTCAGTTTTGGGATGATACTAGGCGTTTTATTAACCGGTAAGGACCCTACGGATCCGTTCTTTGGAGAAGCGGAGAGAGGTGGAAGTTTGGGATGTTGGCTGCGACACTTGAAGCAAGCGGGCGAGGAACGAGAAGCTCTGGATAAGAGTATTTTGGGGGAACAAGGTGAAGAAGATGAGATGCTAATGGCTGTTGGGATTGCTGCTGCATGCTTATCTGATATGCCTGCTGATAGACCTTCAAGCGACGAACTTGTTCACATGCTAACACAGCTTAATAGTTTTTGA 1245 0.4273 MGLICGCDFVGCVLMFRKRQTLFSLSNRLLVFQLLVLFLFCLHHDNRVQCHGRLSKHVSYESRSGSGSEYKDDSKKIIVSVVLGVITGLIGSILFAFVIRCVVRYLNRTPILKGPVIFSPKIASKTLQLALSKENHLLGSSANGKYYKTVLENGLIIAVKKLTPFESNSQESRRKSVKRKIQMELELLASLRHRNLMSLRAYVRGNDGFSLVYDYVSTGSLADVMNRVRENELQIGWEVRLRIAVGVVKGLQYLHYTCVPQILHFNLKPTNVMLDAEFEPRLADYGLAKLLPNLDRGNSLNTPPECFLNSSRYTEKSDIFSFGMILGVLLTGKDPTDPFFGEAERGGSLGCWLRHLKQAGEEREALDKSILGEQGEEDEMLMAVGIAAACLSDMPADRPSSDELVHMLTQLNSF 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi390g00002 414 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 216 413 - -
Vivi390g00002 414 SUPERFAMILY Protein kinase-like (PK-like) 135 409 IPR011009 -
Vivi390g00002 414 Gene3D Phosphorylase Kinase; domain 1 119 215 - -
Vivi390g00002 414 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 124 215 - -
Vivi390g00002 414 Pfam Protein kinase domain 134 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi390g00002 414 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 33 410 - -
Vivi390g00002 414 ProSiteProfiles Protein kinase domain profile. 132 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi390g00002 414 Gene3D Transferase(Phosphotransferase) domain 1 216 413 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi390g00002 78 411 Receptor kinase-like Gene Family AT2G31880 35.014 1.74e-58 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Vivi390g00002 Pkinase 9.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi390g00002 - - gmx:102664273 629.017