Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi38g00080 ATGGCAGGAAGAACCCGAGGAGACCCGTGGAAGAACAGTCCAATTACACGGTTTTCATGGAGTGGCAAAACCATTGCACTGGATCGGAATTCGATAACACTGCCTCCATGGGTGGCAGTAGGGGATCCATTGAGTGGCAAAACCACCCTACTCGATCGCATGACATTAAAATTGAATAAGTTGGGATACAGATACATGATCGATTATGATATCGCAATCTTGGTTCTTGATATTACTATTTACTTACAACAACAAACAATTCGATTGATCAATCTCTTACAAACATGGAACGCAAGGTTCATTGTCGCCTTGAATCGCCTCGACAGGTTTCATGGATGGAAAACATGCAGTAATTCTCAATTTCTTTCATCATTTAACCTCCAGAGTAAGGTCGTTAAACATAGGTTTTATGGAAGGCTCAAAGAGATTAATTCTCAGTTCAAAGAACTTGGGATAAATACATGTTTATATTGTTGGAACAAAGAAATAGGAAAAACTGTCAGCCTTGTGCCTACAAGTGCGAGAAGTGGTGAAGGAGTCCTTGATATGATAGAACAATTGATTTTATTGAGCCAGAAATCTATGGTTGAGAAATTTCATGCCAGGGAAAGATTTAAGTGCACTATTTTGGATGCAAGCAGAAACGCTATCAATGTTGTTTTACTTAATGGTGTTCTTCATGAAGGAGATCAAATAATTGGTCCAATTGTTACCACAATTCAAGTTTTATTAACACTCCCGCAAATAAAAAAACTTGGTGATAAGGCTCATCATATTCGTCATGAAAAAATCAAAAGTGTTAATTCCGTCAAGATAATTGCCAAGGGGCTTGAACATGCTGTTGTTGGCACTTATTTAAATGTGGTGAAGCCTGCCCGAGCCTAA 885 0.3864 MAGRTRGDPWKNSPITRFSWSGKTIALDRNSITLPPWVAVGDPLSGKTTLLDRMTLKLNKLGYRYMIDYDIAILVLDITIYLQQQTIRLINLLQTWNARFIVALNRLDRFHGWKTCSNSQFLSSFNLQSKVVKHRFYGRLKEINSQFKELGINTCLYCWNKEIGKTVSLVPTSARSGEGVLDMIEQLILLSQKSMVEKFHARERFKCTILDASRNAINVVLLNGVLHEGDQIIGPIVTTIQVLLTLPQIKKLGDKAHHIRHEKIKSVNSVKIIAKGLEHAVVGTYLNVVKPARA 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi38g00080 294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 224 IPR027417 -
Vivi38g00080 294 Gene3D Translation factors 204 294 - -
Vivi38g00080 294 SUPERFAMILY Translation proteins 204 289 IPR009000 -
Vivi38g00080 294 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 70 292 IPR015760 -
Vivi38g00080 294 Gene3D - 57 201 IPR027417 -
Vivi38g00080 294 Pfam Elongation factor Tu GTP binding domain 68 190 IPR000795 GO:0003924|GO:0005525
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi38g00080 70 291 Eukaryotic Initiation Factors Gene Family AT1G76810 48.276 4.08e-61 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi38g00080 K03243 - vvo:131614718 567.385