Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi38g00048 ATGAATACTATGATGAATAATAGAACGGTTCACAATGATGAGAAGCCTTTTCCTGGTTGCTTGGGAAGAATGGTTAACCTTTTTGATTTGACTACTGCTACTGGAAATGGAAACAAGCTTCTCACCGACAAGCCACACCGTGATCATGCATCTCTTTCAAGAAGTCAATCAGATGTTTCGAGGATTGCAAGTCCTTCGTTTGCTGATCAGATAGAAGATAGGCCGATTGTTTCTAACTTAATGAGAGCATCTTCAAATAAAAAAATAAATGGAACACCCATCAAGATGCTCATGGACCAAGAAATGTCCAAAGAAGTTGTTTCCAAGCATACTCCACCAAATGTTGTCGCAAAGTTAATGGGCCTCGAAGCCCTTCCACAGGGAAAACGTAATTTACCTGTGGAGAGAAGCCCTGGAGGAGATTGTTCTCAGCACATGTGTGGTCATTCTGGCACATCATTCAATCATCGGCAGTTGGATGATAGGTTTATGGACAAGGAAATGCTTCATGATATTCATCCGAGCAGAGAACAGGTTGCTTACAAAGATATTTATGAAATATGGCTGCAATCACAGAGAACAAGTAATGTTAACGACAAGACACCAGAGAGAGGGAAGTGGGCTGAAGATGTTAATGAGAAGAAAATGGCTTTTATTCGTCAAAAATTCATGGAAGCAAAGCGACTGTCTACAGATGAGAGATTACGCCAATCAAAGGAGTTTGATGAAGCCTTGGAAGTTTTAAGCTCAAATAACGATCTGTTAATCAGGCTATTGGATTCTCAAAATCTATATGAACGGCAGTCTACTCCACTGGCTGAGACAAAGCGCATTACTGTTCTTAAACCTTCAAAGTTGGTTGACAATGAAAAGTTCAGTAGAAAGGGAAACAATAACGACAAACATATTAAGAAACCATTAAATAATGATGCTGCATGGGAGAGAACTAGTCCTGGATACTCTCCTGCCAGTCAGAAAGTTGATGAATTTCCTGTCCAACCTACTCGAATTGTGGTATTGAAGCCTAGTTCTGTGAGAGCACATGATGTTAAGGCCTTGGTTTCTCCAATGTCATTATCACCTCAAAATCTGCAAAGTGGAAACTTCTATCACGGCCCTGAAGATGATGATGATCTACTTGAATCAAGAAAAGTGGCAGAAGACATTACACAGCAAATGCATGAAGACCTCAGGAGCTATCAGAGGGATGAAACCGTGTATTCTCCAGTATTTTCCACTGGATATATTGGTGATGACAGTTCATTCTACAAATCAGATCATGAGTGTACTGCAGGGAATTTTAGTGATTTAGAAGTCATGTCGCCATCTCCCAGGCATTCTTGGGATTTCGTCAATCGCTGTGGAAGTCCTTATTCTTCATCATCCTTCAGTCGTGCTTCGGGCTCTCCTGAATCATCAGTAGGCAGAGAGGCTAAGAAACGACTCTCTGAAAGATGGGCCATGATGGCATCTAAGAAGGATCTTCAAGAGCAAAGACATATGCGGAGAAGCTCTACCTTGGGTGAGATGCTTGCTCTTTCAGATATAAAGAAATCTCTAATATCTGAGGTTGAAGGTATTAATGAAGAACCAGAACCGAGGGAATCTGTTTCTTGCAGTAAAAATTCGAATGATGAAGAAATATCCGTGGATGGGTCTACTAAAAGCCTCCCCAGGTCAAAGTCTGTCCCTGTATCTTCCAATGTCTATGAAAATGGGCTCTACATTGAAGCTTGTAATAACGATGCTGGTAAAGCACACGGCTCCAAGGAGCTGACGAAGTCAAAGAGTATGAAGTCAACATTTAAAGGGAAAGTTGCGAGTTTCTTATTCTCAAGGAATAAGAAATCAATCAGGGAGAAATCTTGTCTTTCTCATTCTACAGATGAATCTCAGTCAACTATTGCAGAAACATCAGTATCTACAATAAACTCACCTGAAGTCTTTAGGAATGATGTGTCTCAAAGCTTCAACGGTGGGTCCTTTGAAGAGTGTTCCCTTCCAGCTCTATGTGAATCATCGAGCAAAACTTTATCCTATCCTGTCTCTAGCAGACGAGGCGTAATATCTATGGAGCCTGAATTTACCACGTCAAAGCCCACAGTGACAGGGATTTCAACTGAAAACCAGGACCAACCAAGTCCAATCTCAGTTTTAGAGCCTCCCTTTGAAGATGAAAATGCAGCTCACGAGTCCTTGGACTGTATGAAGGGTGGTCTGCTTGGATCACGGGTGTCTCTGAAGTCTAATTTAATTGACAAATCACCTCCTATAGAATCAATAGCTCGAACCCTCTCATGGGATGGTTCTTGTGCGGAGGTGGCAAGTTCGTACCCATTAAAGCCTACATCGGTTTCCTTAGACACCAAAGTAGAGGATCAAGACTTGCTCGTCTTTGTTCAGAAATTACTATCAGCTGCTGGACTTGATGATCAAGTGCAGTCTGACTCGTTTTACTCTAGATGGCATTCCCTTGAAAGTCCATTGGAGCCATCATTGAGGGACAAATATGCCAATCTCTACGACAAGGAGGCTCAGCCTCTTCATGAAGCAAAGCGAAGGCAGAGGAGATCTAATCAGAAGCTTGTATTTGATTGTGTCAATGTTGCACTAATAGAAATTACTGGCTATGGATCAGAAAGTTCCTTATTTGGTAGGTTGTGGAGTGGGGACCATAGAAGGCTCCAATTATCAGAGGGTGCACCTCCCCTTTTGGTAGACCTTATTGTAGCCCATATGAAGGAGTTGACATCTAGTGGCATAAGGTCTGTTTGGGGGGATTGTGGGGACAGTAACAGCCTGGTAGTGGAAACTGTAGTGAGAAAAGAGGTCGTGGGTAAAGGGTGGGTTGAGCTAATGGGATTAGAGATGGATATTTTGGTAAAGGAAGTAGAAGGGAAGTTGCTTGAAGAACTTGTGGAGGATGCAGTGGTTGATTTGACAGACAGGGTGGTGTGA 2958 0.4222 MNTMMNNRTVHNDEKPFPGCLGRMVNLFDLTTATGNGNKLLTDKPHRDHASLSRSQSDVSRIASPSFADQIEDRPIVSNLMRASSNKKINGTPIKMLMDQEMSKEVVSKHTPPNVVAKLMGLEALPQGKRNLPVERSPGGDCSQHMCGHSGTSFNHRQLDDRFMDKEMLHDIHPSREQVAYKDIYEIWLQSQRTSNVNDKTPERGKWAEDVNEKKMAFIRQKFMEAKRLSTDERLRQSKEFDEALEVLSSNNDLLIRLLDSQNLYERQSTPLAETKRITVLKPSKLVDNEKFSRKGNNNDKHIKKPLNNDAAWERTSPGYSPASQKVDEFPVQPTRIVVLKPSSVRAHDVKALVSPMSLSPQNLQSGNFYHGPEDDDDLLESRKVAEDITQQMHEDLRSYQRDETVYSPVFSTGYIGDDSSFYKSDHECTAGNFSDLEVMSPSPRHSWDFVNRCGSPYSSSSFSRASGSPESSVGREAKKRLSERWAMMASKKDLQEQRHMRRSSTLGEMLALSDIKKSLISEVEGINEEPEPRESVSCSKNSNDEEISVDGSTKSLPRSKSVPVSSNVYENGLYIEACNNDAGKAHGSKELTKSKSMKSTFKGKVASFLFSRNKKSIREKSCLSHSTDESQSTIAETSVSTINSPEVFRNDVSQSFNGGSFEECSLPALCESSSKTLSYPVSSRRGVISMEPEFTTSKPTVTGISTENQDQPSPISVLEPPFEDENAAHESLDCMKGGLLGSRVSLKSNLIDKSPPIESIARTLSWDGSCAEVASSYPLKPTSVSLDTKVEDQDLLVFVQKLLSAAGLDDQVQSDSFYSRWHSLESPLEPSLRDKYANLYDKEAQPLHEAKRRQRRSNQKLVFDCVNVALIEITGYGSESSLFGRLWSGDHRRLQLSEGAPPLLVDLIVAHMKELTSSGIRSVWGDCGDSNSLVVETVVRKEVVGKGWVELMGLEMDILVKEVEGKLLEELVEDAVVDLTDRVV 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi38g00048 985 MobiDBLite consensus disorder prediction 459 480 - -
Vivi38g00048 985 Pfam Domain of unknown function (DUF4378) 798 975 IPR025486 -
Vivi38g00048 985 Pfam DUF761-associated sequence motif 112 129 IPR032795 -
Vivi38g00048 985 MobiDBLite consensus disorder prediction 524 565 - -
Vivi38g00048 985 Pfam Protein of unknown function (DUF3741) 220 263 IPR022212 -
Vivi38g00048 985 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 983 - -
Vivi38g00048 985 MobiDBLite consensus disorder prediction 524 541 - -
Vivi38g00048 985 MobiDBLite consensus disorder prediction 39 61 - -
Vivi38g00048 985 MobiDBLite consensus disorder prediction 542 565 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi38g00048 5 981 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 43.443 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi38g00048 - - psat:127125933 1819.28