Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi38g00038 ATGGTCAGTATAAGTGATCATAAAGGTAAACAAATAATGTTATCTGATAGTGAAGATAGTGAAGATGATGATCTTTCACCAAGCCCCCATCGAAAAATAATAAGAGCACTTGTTGTGCACCATGATGACCACATTGGAAAGGTTCATGAAGTTACGTTGAATAGACTTGGTGTGGAAACTCGTTCAGTGAAAACTAGCCAAGAAGCTATAAAAATAATTTGTATTGAGGAAGTCTATGACTTAATTCTCCTTGGTAGGTATTTACCTGTCATTGATGGGGTTCAGATGACGAAGATGCTGCGAGACATGGAGTACCCTACAACGATTGTTGGCGTGACGCGTTTCCTTACAGAAGTACAACGGGAAGAATTTTTCAGTGCAGGGCTAGACGGTTGCATTGATAACGAGGCACCCTTGACCGATAAAACGCTTGCATGCATTGTTGAAAGTATTCCCCGTCGCCAAACCTGGAAGAAAAGAAATTTTTATAGTACAATTTACAAATCTTTTCACCGTCCTAGTGTTCCTTTTGGTCCTGGTTCAACCGCTACTTCTAGAGACATTTCTAAAAAAGATTAA 579 0.3955 MVSISDHKGKQIMLSDSEDSEDDDLSPSPHRKIIRALVVHHDDHIGKVHEVTLNRLGVETRSVKTSQEAIKIICIEEVYDLILLGRYLPVIDGVQMTKMLRDMEYPTTIVGVTRFLTEVQREEFFSAGLDGCIDNEAPLTDKTLACIVESIPRRQTWKKRNFYSTIYKSFHRPSVPFGPGSTATSRDISKKD 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi38g00038 192 SMART REC_2 34 147 IPR001789 GO:0000160
Vivi38g00038 192 ProSiteProfiles Response regulatory domain profile. 35 150 IPR001789 GO:0000160
Vivi38g00038 192 PANTHER TWO-COMPONENT RESPONSE REGULATOR 27 156 - -
Vivi38g00038 192 MobiDBLite consensus disorder prediction 1 27 - -
Vivi38g00038 192 Pfam Response regulator receiver domain 37 134 IPR001789 GO:0000160
Vivi38g00038 192 SUPERFAMILY CheY-like 35 133 IPR011006 -
Vivi38g00038 192 Gene3D - 34 171 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi38g00038 31 140 Response Regulator Gene Family AT3G04280 36.607 3.85e-14 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi38g00038 Response_reg 3.9e-10 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi38g00038 - K02483 psat:127125942 197.208