Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi38g00037 ATGGACAATGCAATGAAAGACGGATCCGAAGTCATAACGTTCACTGATATTGACGCTGATCGTCAAACGGGCCCTCGAATAATAAGAGCACTTGTTGTGGACAATGATGACCACATTCGAAAGACTCATGAAGATATTTTGAAAACACTTGGTGTGGAAACTCGTTCAGTGAAAACTGGCCAAGAAGCCTTAGAAATAATTTCTTATGATCGGATCTATGACCTAATCCTCATTCGTAGGACTTTGCCCGTCAAAGATGGAATTGAGGTGACAAAGATGCTGCGAAGCATGGAGTACCCTGGAACTATTATTGGTGTGTCACATTATCCCCTTACAGAAGAACAAGCGAAAGAATTTTATAGAGCAGGGCTAGATGGTTGCATTGATTATGAGACACCGTTGAGAGATAAAACGGTTGAATCACTGGTTAGCAGTATTCCACCTCCCCAACCCTGGCAGAAAAGAGTTAATTATAATGTAGAATACAATTCTTTTTTCCGTCCTGATTCTCCTTTTCGTTTCGGCCAGATTTATCATTCAAGTTCTGGTCCTGGTTCAGGTTCAAGTTCTTGCAAATCTCGCAAATCTCACAAATAG 597 0.4104 MDNAMKDGSEVITFTDIDADRQTGPRIIRALVVDNDDHIRKTHEDILKTLGVETRSVKTGQEALEIISYDRIYDLILIRRTLPVKDGIEVTKMLRSMEYPGTIIGVSHYPLTEEQAKEFYRAGLDGCIDYETPLRDKTVESLVSSIPPPQPWQKRVNYNVEYNSFFRPDSPFRFGQIYHSSSGPGSGSSSCKSRKSHK 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi38g00037 198 SUPERFAMILY CheY-like 29 128 IPR011006 -
Vivi38g00037 198 ProSiteProfiles Response regulatory domain profile. 29 145 IPR001789 GO:0000160
Vivi38g00037 198 Pfam Response regulator receiver domain 31 128 IPR001789 GO:0000160
Vivi38g00037 198 SMART REC_2 28 146 IPR001789 GO:0000160
Vivi38g00037 198 MobiDBLite consensus disorder prediction 177 191 - -
Vivi38g00037 198 MobiDBLite consensus disorder prediction 177 198 - -
Vivi38g00037 198 CDD REC_hyHK_CKI1_RcsC-like 31 128 - -
Vivi38g00037 198 Gene3D - 13 145 - -
Vivi38g00037 198 PANTHER TWO-COMPONENT RESPONSE REGULATOR 25 159 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi38g00037 26 146 Response Regulator Gene Family AT3G04280 37.398 1.47e-19 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi38g00037 Response_reg 1.6e-12 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi38g00037 - K07658 vvo:131614703 355.91