Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi38g00024 ATGAAAGATCAAGAGAAAGGGAAAGGGCTCATGGAACCTCAAAACTCAGCTACTGAATTAAGAGCGCTTATTGTAGATGATGATAAGCTTGTTAGAATGATTCATCAAGGTCTATTGAAAAGAGCTGGTGTGAAAAATGAAGCAGTAAAGAATGGTAAAGAAGCCATAGATATTCATTGTAGTGGTCAAAGTTATGACATTATTTTCATGGACAAAGATATGCCTATCATGAATGGGATTGAGGCAACCAAGAAACTACGATCAATGGGTATTGAAAGCATGATTGTTGGTGCGTCATCATGCAATAGAGATGCAGAAAAACAAGAATTTATTGAGGCAGGGCTAAATGACTATCAAGTGAAACCGTTGACCCTTGAGGCGCTTAAGTCGATTCTCGATGTGGTAAAAGCTAGCAAGTAG 420 0.3833 MKDQEKGKGLMEPQNSATELRALIVDDDKLVRMIHQGLLKRAGVKNEAVKNGKEAIDIHCSGQSYDIIFMDKDMPIMNGIEATKKLRSMGIESMIVGASSCNRDAEKQEFIEAGLNDYQVKPLTLEALKSILDVVKASK 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi38g00024 139 CDD REC_hyHK_CKI1_RcsC-like 23 132 - -
Vivi38g00024 139 Pfam Response regulator receiver domain 23 132 IPR001789 GO:0000160
Vivi38g00024 139 SUPERFAMILY CheY-like 19 135 IPR011006 -
Vivi38g00024 139 Gene3D - 2 138 - -
Vivi38g00024 139 ProSiteProfiles Response regulatory domain profile. 21 136 IPR001789 GO:0000160
Vivi38g00024 139 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 136 - -
Vivi38g00024 139 SMART REC_2 20 132 IPR001789 GO:0000160
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi38g00024 20 124 Response Regulator Gene Family AT3G04280 46.729 2.42e-27 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi38g00024 Response_reg 4.9e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi38g00024 - - cam:101506170 187.193