Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi38g00021 ATGGACAATGCAATGAAAGACGGATCCGAAGTCATAACGTTCACTGATATTGACGCTGATCGTCAAACGGGCCCTCGAATAATAAGAGCACTTGTTGTGGACAATGATGACCACATTCGAAAGACTCATGAAGATATTTTGAAAACACTTGATGTAGAAACTCGTTCAGTGAAAACTGGCCAAGAAGCCTTAGAAATAATTTCTTATGATCGGATCTATGACCTAATCCTCATTCGTAGGACTTTGCCCGTCAAAGATGGAATTGAGGTGACAAAGATGCTGCGAGCCATGGAGTACCCTGGAACTATTATTGGTGTGTCACATTATCCCCTTACAGAAGAACAAGCGAAAGAATTTTATGGAGCAGGGCTAGATGGTTGCATTGATTATGAGACACCGTTGAGAGCTAAAACGGTTGAATCACTGGTTAGCAATATTCCACCTCCCCAACCCTGGCAGAAAAGAGTTAATTATAATGTAGAATACAATTCTTTTTTCCGTCCTGATTCTCCTTTTCGTTTCGGCCAGATTTATCATTCAAGTTCTGGTCCTGGTTCAGGTTCAAGTTCTTGCAAATCTCGCAAATAG 588 0.4116 MDNAMKDGSEVITFTDIDADRQTGPRIIRALVVDNDDHIRKTHEDILKTLDVETRSVKTGQEALEIISYDRIYDLILIRRTLPVKDGIEVTKMLRAMEYPGTIIGVSHYPLTEEQAKEFYGAGLDGCIDYETPLRAKTVESLVSNIPPPQPWQKRVNYNVEYNSFFRPDSPFRFGQIYHSSSGPGSGSSSCKSRK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi38g00021 195 Gene3D - 13 145 - -
Vivi38g00021 195 SUPERFAMILY CheY-like 29 128 IPR011006 -
Vivi38g00021 195 SMART REC_2 28 143 IPR001789 GO:0000160
Vivi38g00021 195 ProSiteProfiles Response regulatory domain profile. 29 145 IPR001789 GO:0000160
Vivi38g00021 195 CDD REC_hyHK_CKI1_RcsC-like 31 143 - -
Vivi38g00021 195 PANTHER TWO-COMPONENT RESPONSE REGULATOR 25 160 - -
Vivi38g00021 195 Pfam Response regulator receiver domain 31 128 IPR001789 GO:0000160
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi38g00021 26 146 Response Regulator Gene Family AT3G04280 36.585 2.47e-18 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi38g00021 Response_reg 5.8e-12 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi38g00021 - K07775 vvo:131614703 371.318