Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi38g00008 ATGCTTAACTTGTTCATATTTGAATTCTTCCTCAACACCTTCAAATACCCCTACAATTCACCCACAAAATCATGCACCACACAACACACTCTTCTTCTTCTCCTACTACTACTACAACAAAAATCAATGGAGTCCAAATTTCAACTCTTTTTCTTCACTCTTTCCCTTCTCATTCTCACCATTCATGCACAAACTCTTGCAACTTACATAGTTCAGTTACACCCTCATGGCACAACCAAGTCTATGTTCACCAACAAACTTGAATGGCATCTATCATTCATACAACAAACCATTTCATCTGATGAAGACCCTTCCTCGCGCCTACTATACTCGTACCGTTCCGCTATGGACGGTTTCGCAGCTCAGTTAACCGAGGCTGAGATTGAGTATTTACAAAGAATTCCTGATGTTATCTCCATTAGGCCTGATAGGAATCTCCAGATTCAAACCACATATTCTTATAAATTCTTAGGACTCAGTCCTGCTAGAGAAAATGGTTGGTATCAATCTGGTTTCGGCCGTGGAACCATAATCGGTGTGCTTGATACCGGAGTTTGGCCAGAGAGTCCTAGCTTCATTGATCACGATATGCCTCCTGTTCCGAAGAAATGGAAAGGTATATGCCAATCAGGCCAAGCCTTTAACTCTTCCAATTGTAACAAGAAACTCATTGGTGCAAGGTACTTCACCAAAGGCCATTTTGCAGTATCACCTACAAGAATTCCAGAATATCTCTCCCCAAGAGACTCTTCTGGACATGGAACACACACTTCATCTACCGCTGGTGGAGTTCCGGTGCCAATGGCGAGTGTTTTCGGTTACGCCAACGGTGTGGCAAGAGGTATGGCTCCAGGTGCTCACATTGCAGTATACAAAGTTTGCTGGTTCAATGGCTGCTATAACTCTGACATCATGGCTGCATTGGATGTGGCAATCAGAGACGGCGTCGACGTTCTATCGTTGTCTCTAGGTGGTTTTCCAGTGCCTCTGTATGATGACAGTATTGCAGTTGGAAGCTTTAGAGCAATGGAGAAAGGAATTTCGGTTATATGCGCAGCGGGAAACAATGGTCCAATGGCAATGTCTGTTGCCAATGATGCTCCTTGGATTGCCACTATTGGTGCAAGCACACTTGACAGGAAATTCCCTGCTATAGTTCGCATGGCGAACGGAAAAATTCTCTACGGAGAATCCATGTATCCAGTAAACAACAGAATGGCAAGCAAAAGCAAAGTACTTGAGCTGGTTTACCTATCTGGTGGAGATAGTGAGAGTCAATTTTGCCTCAAAGGCTCTCTTCCAAAAGACCAAGTTCAAGGCAAAATGGTGGTATGCGACCGCGGTGTCAACGGAAGATCAGAAAAGGGTGAAGCTGTGAAGGAAGCAGGTGGTGCTGCTATGATCTTAACAAACACAGAGCTAAACTTAGAAGAAGATTCCGTTGATGTTCATCTCTTGCCAGCAACATTGGTAGGATTTGACGAATCAATCACCTTGAAAGCTTACATAAACTCCACAAAAAAACCACTTGCTAGGATCGAATTCGGAGGAACTGTAATCGGGAAGTCTAGAGCACCAACAGTAGCAATATTCTCAGCCAGAGGACCAAGTTTCACAAACCCTTCAATCCTTAAACCAGATGTCATAGCTCCAGGCGTCAACATCATTGCTGCATGGCCTCAGAATCTTGGTCCAACAGGCTTACCAGAAGACAAAAGAAGAGTAAACTTCTCTGTCATGTCAGGTACCTCGATGTCATGTCCTCATGTCAGCGGAATCGCGGCTCTTATCCGTTCTGCGCATCAAAACTGGAGCCCTGCAGCTATCAAATCAGCAATCATGACAACCGCAGACGTAATAGACCATACAGGAAAACCAATACTCGACGAAGACAAACCCGCTACATCCTTCGCAATGGGATCCGGAAATGTGAATCCACATAAAGCATTAAATCCCGGACTGATATACGATATCAAACCAAACGATTACGTCAACCATCTTTGCAGCATTGGTTACACAAACTCAGAAATATTCAGCATCACACACAGAAACATTAGCTGCCATGCAATCATGCAGAAGAATCGAGGCTTCAGCCTTAACTATCCCTCAATATCAGTGATTTTTAAAGACGGAACGAAGCGAAAAATGTTCAGCAGGAGAGTAACAAATGTAGGAAATCCTAACTCCATCTACTCAGTGGAAGTTGTAGCACCTCAAGGAGTGAAAGTGATTGTGAAACCAAAGAAGCTAGTATTTAAACAAGAAAATCAAAGCTTGAGCTACAAAGTTTGGTTTATATCAAGAAAAAGGGTTACCACTAACTTTGCAGAAGGACATTTGACATGGATACACTCACAAAATGGTTCTTACAGAGTTAGAAGCCCAATAGTAGTAACTTGGAAGACTAAGTAG 2412 0.4316 MLNLFIFEFFLNTFKYPYNSPTKSCTTQHTLLLLLLLLQQKSMESKFQLFFFTLSLLILTIHAQTLATYIVQLHPHGTTKSMFTNKLEWHLSFIQQTISSDEDPSSRLLYSYRSAMDGFAAQLTEAEIEYLQRIPDVISIRPDRNLQIQTTYSYKFLGLSPARENGWYQSGFGRGTIIGVLDTGVWPESPSFIDHDMPPVPKKWKGICQSGQAFNSSNCNKKLIGARYFTKGHFAVSPTRIPEYLSPRDSSGHGTHTSSTAGGVPVPMASVFGYANGVARGMAPGAHIAVYKVCWFNGCYNSDIMAALDVAIRDGVDVLSLSLGGFPVPLYDDSIAVGSFRAMEKGISVICAAGNNGPMAMSVANDAPWIATIGASTLDRKFPAIVRMANGKILYGESMYPVNNRMASKSKVLELVYLSGGDSESQFCLKGSLPKDQVQGKMVVCDRGVNGRSEKGEAVKEAGGAAMILTNTELNLEEDSVDVHLLPATLVGFDESITLKAYINSTKKPLARIEFGGTVIGKSRAPTVAIFSARGPSFTNPSILKPDVIAPGVNIIAAWPQNLGPTGLPEDKRRVNFSVMSGTSMSCPHVSGIAALIRSAHQNWSPAAIKSAIMTTADVIDHTGKPILDEDKPATSFAMGSGNVNPHKALNPGLIYDIKPNDYVNHLCSIGYTNSEIFSITHRNISCHAIMQKNRGFSLNYPSISVIFKDGTKRKMFSRRVTNVGNPNSIYSVEVVAPQGVKVIVKPKKLVFKQENQSLSYKVWFISRKRVTTNFAEGHLTWIHSQNGSYRVRSPIVVTWKTK 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi38g00008 803 FunFam Subtilisin-like protease SBT1.9 58 149 - -
Vivi38g00008 803 Pfam Fibronectin type-III domain 699 798 IPR041469 -
Vivi38g00008 803 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 102 798 IPR045051 -
Vivi38g00008 803 Pfam Peptidase inhibitor I9 68 148 IPR010259 -
Vivi38g00008 803 Gene3D Peptidase S8/S53 domain 175 663 IPR036852 GO:0004252|GO:0006508
Vivi38g00008 803 ProSiteProfiles Serine proteases, subtilase domain profile. 151 650 - -
Vivi38g00008 803 SUPERFAMILY Subtilisin-like 64 690 IPR036852 GO:0004252|GO:0006508
Vivi38g00008 803 Pfam PA domain 424 494 IPR003137 -
Vivi38g00008 803 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 59 149 IPR037045 -
Vivi38g00008 803 CDD PA_subtilisin_like 386 513 - -
Vivi38g00008 803 Gene3D - 667 800 - -
Vivi38g00008 803 FunFam subtilisin-like protease SBT1.5 379 520 - -
Vivi38g00008 803 FunFam Subtilisin-like protease SBT1.5 175 392 - -
Vivi38g00008 803 Pfam Subtilase family 173 628 IPR000209 GO:0006508|GO:0008236
Vivi38g00008 803 Gene3D - 379 520 - -
Vivi38g00008 803 ProSitePatterns Serine proteases, subtilase family, serine active site. 582 592 IPR023828 -
Vivi38g00008 803 FunFam Subtilisin-like protease SBT1.5 667 801 - -
Vivi38g00008 803 PRINTS Subtilisin serine protease family (S8) signature 581 597 IPR015500 -
Vivi38g00008 803 PRINTS Subtilisin serine protease family (S8) signature 249 262 IPR015500 -
Vivi38g00008 803 PRINTS Subtilisin serine protease family (S8) signature 173 192 IPR015500 -
Vivi38g00008 803 CDD Peptidases_S8_3 146 618 IPR034197 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi38g00008 43 802 Subtilisin-like Serine Gene Family AT1G04110 66.366 0.0 1073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi38g00008 - - vvo:131622287 1579.69