Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi384g00029 ATGTCAAATGAGCAACAAAACCAATACCCCGAAGCACAAAACCAGGATAAAGAGCAATTCGAGTCTGAAGGACCATCGCCCCTAACCGTTGCTTCCCGGGTTTTTAATTGGCTTCAATCAGTTCGAAAACGCACTTCCAATTACCGCTCCTCCGGTTTCCCTCGCTCTTCTTCCGTACCCTTTTGTTTTGGAGAATCTGCAGAGGATGCAGAAATTGATATGCTTCCTGATCAAACTGAAATTAGCGTGTGGGATAGGCTTGGTAAAGCTGAAATGTTGGACATTGAATCAAATTCCTTTTCTTGGGACATGCTCTCTTCACTTCACCATACTGAGCACACCAGTAGCAATGAGCATTCTGAAGATGAAATGAACAGAGCTCTTGAGATGACAGTAAATTCTGGAGGGGTTGTCTTCTTTGCCCTTTTCAATGTCGGGAGCGATGATGCTTCTCCAAAAGAAGCAGCAGCGGTCATAAAAATATCTTCGTCAAGAATGGCAACACAGTCTGAACGACTTGGATATGAATTCGCCAAATGGTTGGGAGTCCAAGCTCCACAGGCTAGAGTCATTCACAATACCAGTATAGAATGGCTCCAAATAAGGGAAGCGGCAGAAAAAGCAAGGGATGCAGCAAGTTGTGAGAGTGATGTTATTGGTGAAACGACCTGTTCGGAACTTTTGGAAGCACTAGAGCTTAGTCGGTGTCTCTTGTTTATGAGTTATGTACATGGCTCACCTTTACTTGAAAGCTCTAGCGCGTTTGAATCAAGGGATTCTGCAGAAAGAACGTCAGCCGCGCTTGGCAGGGTAATGATGCTAGATCTTGTTATTAGAAATGAAGATAGACTCCCATGCCCTCAACTTAGATGGCGTGGGAACCCTGCCAATTTGTTATTGGCTGAAAAAGCAATCCCTTCAAATTTAGATACAAAAGAAGAAAGTGTTGATTTGGTAATGAACCGGTCCAGGGTAGTTGGGGCGCTGCAGAAAAAGAAAAGGTCCACTTCAAGATCATGTTCTCATAATAATGAAATAAGATCACAAGGCTCTCCTCTTTCACTTATAAGAGAATCATCTGATGACATGTGCCTTAAAAGTCAAACGTCTACTGGATCCAACATTGTGGCTATTGACTCTGGTGTTCCTCGTCGACCTCCTGCTGTAAAACGTGCAGATGATCAGGTAAGTTATCCTAAGTTGGTTGAATTAGTACTGAATAGCTCTGAGTTTTCCTCTTGCCTCTTACATGATATAACCGGAGGGAAATTAGGAAGTCCTCCCTTAGAAGACATAAATTTAACGGTCGACATACAAGGGACTGATGTAACATCAATAGTTCACGAGTTCCGTTGTGGTTTCCGTGCTGCTCTTAGGGATCTGCAAGGATTTCATATATTCCTACTTACACTCCACCAAAAACTTGATAACTTGTTACGATCATTTAATAATACTATAAGCAAAATATCACCGGGGGAGTCTGAAAAGGAAGATTCACCTTCACCTGCTACTGGTTGTTGTCTCTCTCCAACAAGAAAAGAGAGATTTTCTAATGATAGCCATCAAGATTTTAGTGATTCAGATTCACAGAGATCTGCTCCAAGGGCATTGTCATCTTCAGGCAATAGGAATATTTGCGACTCGGCTTCTCCTATGTCAAGAGAAGGTTGCCATGGAAAATCCTCCAAAGGGAGTCTGGAGCCATTGCATGATTCTCATTTTACAGCTAAGCTCCGAGACTTCCATAAATTTGCCAAGGTTGATGCAGAATCTTATAAAGAATTGGAACACTGGAATGAAATGCTTAAAAGTGATGCTATCAAGTTATGCCAGGAGAACAATTTCAATTCAGGATTTTTTGAGGGAAGTGATAGCAACACTGTTGTTGATGCATATGAATTGAAGATCAGACTTGAGCATATCCTTGAAAGGATTGCATTGATATCAGAGGCTGCAAATACAGAGAGACCATCTGCTATTACAAATTGTTTGTTCATCGGTGGTGCGCTATCTGCAAGATCTATATACACAATGCAACACTTGGGAATCACTCATATCTTGTGTTTGTGTACTAATGAAATTGGACAATCAGATTCTCAATTTCCGGATCTTTTCACCTACAAAAATTTCTTTGTATGTGACACCGAGAATTCTAACATCAGCCTCTTATTTGAAGAAGCTTGTGATTTTATAGAAGATGTCGAGAGAACAGGTCAGGGAATTCTAGTCCATTGTTTCGAAGGAAAAAGCAGAAGTGTCACTGTAGTCCTTGCTTACTTGATGCTAAGAAAGAGTTTCACATTACTAGAAGCATGGAATGCTATGAAAAAAGTTCACCGTCGAGCACAGCCGAACGACGGTTTTGGAAAGATTTTACAGGAACTGGATCAAAAACTCCATGGGAAGGTTTCAATGGAGTGGCGGAGGCGGAGACCAACAATGAAAGTTTGTCCTATATGTGGCAAGAATGCTGGACTTAGTAGCAGCTCACTTAAGCTCCATCTTCAGAAATCTCATAAAAGACTATCATCCGGAAGTGTAGATAGTGCCATGACAATGGAAATCCAAAAGGCATTAACCACTTTGAATATTAGCCGTGGCGGGAGTGTGAGCCCCACACACAGGCTATCTCATTCAATGACAGATTAA 2649 0.4164 MSNEQQNQYPEAQNQDKEQFESEGPSPLTVASRVFNWLQSVRKRTSNYRSSGFPRSSSVPFCFGESAEDAEIDMLPDQTEISVWDRLGKAEMLDIESNSFSWDMLSSLHHTEHTSSNEHSEDEMNRALEMTVNSGGVVFFALFNVGSDDASPKEAAAVIKISSSRMATQSERLGYEFAKWLGVQAPQARVIHNTSIEWLQIREAAEKARDAASCESDVIGETTCSELLEALELSRCLLFMSYVHGSPLLESSSAFESRDSAERTSAALGRVMMLDLVIRNEDRLPCPQLRWRGNPANLLLAEKAIPSNLDTKEESVDLVMNRSRVVGALQKKKRSTSRSCSHNNEIRSQGSPLSLIRESSDDMCLKSQTSTGSNIVAIDSGVPRRPPAVKRADDQVSYPKLVELVLNSSEFSSCLLHDITGGKLGSPPLEDINLTVDIQGTDVTSIVHEFRCGFRAALRDLQGFHIFLLTLHQKLDNLLRSFNNTISKISPGESEKEDSPSPATGCCLSPTRKERFSNDSHQDFSDSDSQRSAPRALSSSGNRNICDSASPMSREGCHGKSSKGSLEPLHDSHFTAKLRDFHKFAKVDAESYKELEHWNEMLKSDAIKLCQENNFNSGFFEGSDSNTVVDAYELKIRLEHILERIALISEAANTERPSAITNCLFIGGALSARSIYTMQHLGITHILCLCTNEIGQSDSQFPDLFTYKNFFVCDTENSNISLLFEEACDFIEDVERTGQGILVHCFEGKSRSVTVVLAYLMLRKSFTLLEAWNAMKKVHRRAQPNDGFGKILQELDQKLHGKVSMEWRRRRPTMKVCPICGKNAGLSSSSLKLHLQKSHKRLSSGSVDSAMTMEIQKALTTLNISRGGSVSPTHRLSHSMTD 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi384g00029 882 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 656 801 IPR029021 -
Vivi384g00029 882 SMART dsp_5 656 798 IPR020422 GO:0006470|GO:0008138
Vivi384g00029 882 MobiDBLite consensus disorder prediction 490 569 - -
Vivi384g00029 882 CDD DSP 657 794 - -
Vivi384g00029 882 SUPERFAMILY Protein kinase-like (PK-like) 37 395 IPR011009 -
Vivi384g00029 882 MobiDBLite consensus disorder prediction 529 549 - -
Vivi384g00029 882 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 4 881 IPR035010 GO:0004721|GO:0009737|GO:0043622
Vivi384g00029 882 Pfam Actin-fragmin kinase, catalytic 80 318 IPR015275 -
Vivi384g00029 882 ProSiteProfiles Dual specificity protein phosphatase domain profile. 656 801 IPR020422 GO:0006470|GO:0008138
Vivi384g00029 882 MobiDBLite consensus disorder prediction 514 528 - -
Vivi384g00029 882 MobiDBLite consensus disorder prediction 1 26 - -
Vivi384g00029 882 FunFam Dual specificity protein phosphatase PHS1 628 802 - -
Vivi384g00029 882 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 725 777 IPR000387 GO:0016311|GO:0016791
Vivi384g00029 882 Pfam Dual specificity phosphatase, catalytic domain 667 796 IPR000340 GO:0008138|GO:0016311
Vivi384g00029 882 Gene3D - 248 490 IPR036940 -
Vivi384g00029 882 Gene3D Protein tyrosine phosphatase superfamily 639 810 IPR029021 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi384g00029 21 867 Protein tyrosine phosphatase (PTP) family AT5G23720 59.910 0.0 968
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi384g00029 K14165 - gmx:102661225 1203.73