Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi384g00017 ATGAAGGAATCAACAGACTCAGACCCAATAACAATTTGCCTCACTCTAACCAACTCCCTTCTCCACCAAGAAATCCCCACCGTCCATCACTTAAAATCCAAATGGTCAATCGCCCGACTCAAACTCACCTCCCTCCAAACCCACCTCACCGATTTCTCCACCGAATATTCCACTTCCTCCACCACCAACCCCCTCTCCCTCCACCTCCTCCACTCCATCACCCAAACCCTCCACGACGCCGTTTCACTCTCTCACCACTGCCAATCCCCCTCCGATTTACCTCTCGGAAAACTCCAAACCCAAAGCCACCTCGACTCCCTCATCGCCACCCTCCACCGCCACCTCAACGACTGCGACGTCCTCTTCCGCAGCGGCCTCCTCCTCGAAACCCCCGCTTTCTCCAAACGTGAAGCCGTTCGATCTCTTTCCAGAAACCTCATCGCACGGTTGCAAATCGGGTCCACTGACTCAAGAGCCGCCGCGATTGATTCACTTCTCTCCTTACTCCACGAAGACGATAAAAATGTTACTATAGCCGTCGCGCAGGGTGTAGTTCCGGTGCTCGTTCGTTTACTGGACTCCTCCTCTGATATGAAGGAGAAAACCGTCGCTGCTATTTCTAAAGTCTCGACAGTGGATAGTGGGAAGAATAATCTACTTGCGGAGGGGTTGTTGCTGTTGAATCATTTGCTTAGGGTTTTGGATTCTGGAAGTGGTTTAGCTATAGAGAAAGCTTGTATTGCGCTTCAGGCGTTGAGTTTTACTAGAGATAATGCGAGAGCGATTGGATCTAGAGGTGGGATTTCGTCTCTGTTAGGGATTTGTCAGGGTGGGACGCCTGGTTCGCAAGCTTCGGCGGCGGCGGTTTTGAGGAATTTGGCGAAATTTAATGAGATTAGAGAGAATTTTGCGGAGGAGAATGCGGTTGGTGTTTTGTTAGGGTTGGCTTCTTCTGGGACGATATTGGCGCAAGAGAATGCGATTGGTTGTGTGGCGAATTTGATTTCGGAGGATGAGGGGATGAGGGTTTTGGCTTATAAGGAAGGTGGGATTGAGTGTTTGAAGAATTTTTGGGATTCGGCTCCGATGATTCAGAGTCTTGAAGTTGGTGTTGAAATGTTGAGGTATTTGGCGTTGACGGGTCCGATTGGGGAGGTTCTTGTTGCAGAAGGGTTTATTGGGAGGGTGATGGGAGTGTTGAATTGTGAAGTTCTGACGGTGAGGATAGCGGCTGCGAAAGCGGTTTATGCAATGGGTTTGAATGGTGGAAACAAAACCAGAAAGGAAATGGGGGAATGTGGGTGTGTTCCTTTTTTGATTAAGATGTTAGATGGGAAAGGCGCGGAGGAGAAAGAATCCGCTGCAATGGCGTTGTCCGTGTTACTGCAACACCCTTTCAATAGAAGGGTTTTTCGGAAGGATGAAAGGGGAATAGTTAGTACAGTTCAGCTATTGAACCCTTCTTTGGTTAATTTAGATAAGCAATACCCAGTTTCTGTTCTGGTTTCGCTCTTGCATTCTAAGACTTGTAGGAAACAAATGGTGGCTGCTGGTGCTGGTGTATATACGCAGAAGCTTGTTGAATTGGATGTTCCGGGTTCAAAGAAATTGTCGGATGGACTTGGTCGTGGTAAGATCTGGGGAGTTTTTGCAAGACCCTAA 1662 0.485 MKESTDSDPITICLTLTNSLLHQEIPTVHHLKSKWSIARLKLTSLQTHLTDFSTEYSTSSTTNPLSLHLLHSITQTLHDAVSLSHHCQSPSDLPLGKLQTQSHLDSLIATLHRHLNDCDVLFRSGLLLETPAFSKREAVRSLSRNLIARLQIGSTDSRAAAIDSLLSLLHEDDKNVTIAVAQGVVPVLVRLLDSSSDMKEKTVAAISKVSTVDSGKNNLLAEGLLLLNHLLRVLDSGSGLAIEKACIALQALSFTRDNARAIGSRGGISSLLGICQGGTPGSQASAAAVLRNLAKFNEIRENFAEENAVGVLLGLASSGTILAQENAIGCVANLISEDEGMRVLAYKEGGIECLKNFWDSAPMIQSLEVGVEMLRYLALTGPIGEVLVAEGFIGRVMGVLNCEVLTVRIAAAKAVYAMGLNGGNKTRKEMGECGCVPFLIKMLDGKGAEEKESAAMALSVLLQHPFNRRVFRKDERGIVSTVQLLNPSLVNLDKQYPVSVLVSLLHSKTCRKQMVAAGAGVYTQKLVELDVPGSKKLSDGLGRGKIWGVFARP 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi384g00017 553 Gene3D - 139 535 IPR011989 -
Vivi384g00017 553 SUPERFAMILY ARM repeat 145 491 IPR016024 -
Vivi384g00017 553 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 14 551 - -
Vivi384g00017 553 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 183 224 IPR000225 GO:0005515
Vivi384g00017 553 SMART arm_5 296 336 IPR000225 GO:0005515
Vivi384g00017 553 SMART arm_5 255 295 IPR000225 GO:0005515
Vivi384g00017 553 SMART arm_5 423 463 IPR000225 GO:0005515
Vivi384g00017 553 SMART arm_5 172 211 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi384g00017 141 296 U-box Gene Family AT1G23030 30.380 1.13e-10 62.4