Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi383g00019 ATGATGGATTCCGCCACCGTGTCCCACGATGATCAGAAGGTTAGCAGAAGATATATTCCAATATCATTCTACATGGATTCCGCCGTCAACCACCCTGGTCCGATTCGTAAGGTCAGCAAAAATTCTATCCCACTATCGTTCTACACAACCACCCACGTCTACCACCCTGCTCCTGATCCGACCTCTGAATCAAAGATGGATGTATTTGTGGTAAATGAAGAAAAGGATACCAGAAAGAAGAATCCACTATCGTTCTACATGGATCCCACCGTCTCCCACCCTGGTCCGTTGCTTATAAACTATATACAACCATACAATTCATCTGAATCAAATTCAAATTCATCTGAATCAAAATCAAAGATCATCTTTGGTAGCTTTGGTTCCGAGTCCTCTGAATCAAAGTCTGTGGCAAATGTCAGCAAAAACTATATTCCACTACCCACCGCTATTCCCGATAAATTTGCTTCCTCTATTCTTTCGAAACTCCCCATAAAGTCATTGAAGCGCTTTGGATGCGTACGTAAATCATGGTCTATTTTATTTGAAAACACTGATTTCATGACAATGTACAGAAAACATTTCATATCTCGTCATGGTTCTGACGATGATTATCATACATTTATTCTCACAAGTGATAAGCTTGATCATGGTCTTGTCCACTCTGAATTTTATTTGGTCGAAAATAGACTCGAACTAAATTTGTCATCTCCACTTCAACAGTCTGGCGAATATACTTGTATTCTCGGCTCCACAAGTGTTAACGGCTTTTTTTGTCTCGGCCAACATTATCTAGCTATGAAGACGCCCCGATATGTATTATGGAATCCCCTTACCGACGAATTCATGGGCATTCCTTCTAGCCCCACTGAACTTACACCAAAACACCCTAGTTTCGACACCCTCAGTCTCGAACCTATTTTTCACGGGTTTGGTTATGACCAACTTAGACATGACTTTAAGGTCGTTCAGTATGTATCATTTGTTTCCGCTCGCTCTTCTCGGCTTACAACAAGTTTTTTTGAGATATATAGTTTAAAAAGTAATTCTTGGAGAATGATCGACATGGACAATGATCTGTCTCATTGGGGTTATTTTTATTCTAGGGCATTTTCTGGTCACGAAGTTTATCTGGATGGAGCGTGTCATTGGTTGGTTTCGGAATGTATCAACCATCGAAGGGCTATGACCGTCTTGTCATTTGACTTGAGTCGTGAGGTGTTCTTTACAACACCCGTCGGGGAACAACCTTATGCTCCATACGCTGATCTTCTATGCTTGACAGTGTTAAATGGATCTATTGCTTTACTATCCAATCATCACGACGATGTTGTTTTTCACATATCTATTCTGGGTGAACTCGGTGTGAGTGAATCATGGATCAAACTATATACTTATGGCCCCTCACCTTCCATCCAATGGCCACCACTTGGATTTGGGAAGATGGGACATCTTTTCATTAGAAAAAAAGATCATGAAATCGCCTATGTTGATTTGAGCACCCAAATTATTGAGGAGGTTGGTATTACTGGTGGAAAGACAAATTATAATATTGGTGGTCTTTACAAGGAAAGCCTTCTTTCGTCGGAGGATCAATGTAACTAG 1602 0.407 MMDSATVSHDDQKVSRRYIPISFYMDSAVNHPGPIRKVSKNSIPLSFYTTTHVYHPAPDPTSESKMDVFVVNEEKDTRKKNPLSFYMDPTVSHPGPLLINYIQPYNSSESNSNSSESKSKIIFGSFGSESSESKSVANVSKNYIPLPTAIPDKFASSILSKLPIKSLKRFGCVRKSWSILFENTDFMTMYRKHFISRHGSDDDYHTFILTSDKLDHGLVHSEFYLVENRLELNLSSPLQQSGEYTCILGSTSVNGFFCLGQHYLAMKTPRYVLWNPLTDEFMGIPSSPTELTPKHPSFDTLSLEPIFHGFGYDQLRHDFKVVQYVSFVSARSSRLTTSFFEIYSLKSNSWRMIDMDNDLSHWGYFYSRAFSGHEVYLDGACHWLVSECINHRRAMTVLSFDLSREVFFTTPVGEQPYAPYADLLCLTVLNGSIALLSNHHDDVVFHISILGELGVSESWIKLYTYGPSPSIQWPPLGFGKMGHLFIRKKDHEIAYVDLSTQIIEEVGITGGKTNYNIGGLYKESLLSSEDQCN 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi383g00019 533 NCBIfam F-box protein interaction domain 252 466 IPR017451 -
Vivi383g00019 533 PANTHER OS02G0783600 PROTEIN 157 466 - -
Vivi383g00019 533 SUPERFAMILY F-box domain 148 209 IPR036047 GO:0005515
Vivi383g00019 533 Pfam F-box associated 374 498 IPR006527 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi383g00019 340 497 Carbohydrate Esterase AT1G25141 25.000 8.25e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi383g00019 - - vvo:131602513 1011.52