Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi37g00006 ATGAAGTGTTTTTCATTCCATTCTTGTAATAAGAAAGATGAACCAAAAGGGATGCAATCTGCGTCGGGCCGGTCGGACAGTTCGGCGTATGTTGATGTTGAAGGTAGAGGAGGTGGTTCTGAGTTGAATTCTCGGGAGGTTTCGGATAGTGGCAGTGTGGAATCTCTCAGGAGGAACGCGCCTCCGAATTTGTCCCAACGGCCGAGTAGCCTTAGAGTGTTTACTGTATCGGAACTGAAATCAGCCACCAAGAGTTTCAGTCGGTCGGTTATGCTTGGAGAGGGCGGGTTCGGTTGTGTCTATCAGGGTGTAATTAGAAGTGTAGATGATCCTTCTAAAAGAATTGAGGTTGCTGTTAAACAACTTAGTAAAAGAGGAGTGCAGGGGCATAGGGAATGGGTGACGGAAGTGAATGTTCTAGGCATTGTTGAGCATCCAAATCTTGTGAAATTAGTGGGATACTGTGCCGATGATGACGAAAGAGGAATCCAACGGCTTTTGATTTATGAATACATGCCGAACAAAAGTGTGGAACACCATTTATCTCACCGAGCAGAGACTCCTCTCCCGTGGAGTAGGAGATTAAAAATAGCACAAGACGCCGCTCGTGGATTAACATACCTGCATGAAGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCGAATATCCTTTTGGATGATCAGTGGAATGCAAAGCTATCAGATTTCGGATTAGCGAGACTGGGACCATCGGATGGACTAACTCATGTCTCAACAGCAGTTGTAGGAACAATGGGGTACGCAGCTCCTGAATATCTCCAAACCGGACGTCTCACATCGAAAAATGACGTATGGAGCTACGGCGTTTTCCTTTATGAGATCATTACTGGCAGACGCCCTTTAGATCGAAATCGCCCCAAGGGTGAACAGAAGTTGTTGGAATGGATAAAGCCGTACCTATCAGATACAAAGAAATTTCAACTGATATTGGATCCAAGACTTGATAAGAAACAAGTACTCAAATCAGCCCAAAGACTTGCTAATATAGCTAACCGTTGCTTAGTTAAAAACCCGAAGAATCGCCCGAAGATGAGTGAGGTTTTGGGAATGGTGAATGGAATAATGGAATCATCATCCGACGCTAATTCACTACTACCCTTGAAGAATGTTTCGAGAGTAGAAGTTTCTCAAGACGTTGAAACGAATAACGCGAAGAAACGGAGCATGGATCAGAAGTCTAGAGAAAGTAATTGGTTTTTTAAGATGTGGAGACCAAAGCTTTTAAGAACATGA 1281 0.434 MKCFSFHSCNKKDEPKGMQSASGRSDSSAYVDVEGRGGGSELNSREVSDSGSVESLRRNAPPNLSQRPSSLRVFTVSELKSATKSFSRSVMLGEGGFGCVYQGVIRSVDDPSKRIEVAVKQLSKRGVQGHREWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNKSVEHHLSHRAETPLPWSRRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDDQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYLQTGRLTSKNDVWSYGVFLYEIITGRRPLDRNRPKGEQKLLEWIKPYLSDTKKFQLILDPRLDKKQVLKSAQRLANIANRCLVKNPKNRPKMSEVLGMVNGIMESSSDANSLLPLKNVSRVEVSQDVETNNAKKRSMDQKSRESNWFFKMWRPKLLRT 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi37g00006 426 CDD STKc_IRAK 92 370 - -
Vivi37g00006 426 MobiDBLite consensus disorder prediction 43 67 - -
Vivi37g00006 426 PANTHER OS01G0588500 PROTEIN-RELATED 48 368 - -
Vivi37g00006 426 Pfam Protein tyrosine and serine/threonine kinase 91 364 IPR001245 GO:0004672|GO:0006468
Vivi37g00006 426 ProSiteProfiles Protein kinase domain profile. 86 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi37g00006 426 MobiDBLite consensus disorder prediction 1 19 - -
Vivi37g00006 426 Gene3D Transferase(Phosphotransferase) domain 1 172 390 - -
Vivi37g00006 426 MobiDBLite consensus disorder prediction 1 67 - -
Vivi37g00006 426 Gene3D Phosphorylase Kinase; domain 1 59 171 - -
Vivi37g00006 426 FunFam Serine/threonine-protein kinase PCRK2 172 380 - -
Vivi37g00006 426 SUPERFAMILY Protein kinase-like (PK-like) 63 366 IPR011009 -
Vivi37g00006 426 FunFam Serine/threonine-protein kinase BIK1 54 171 - -
Vivi37g00006 426 ProSitePatterns Protein kinases ATP-binding region signature. 92 120 IPR017441 GO:0005524
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi37g00006 1 382 Glycoside Hydrolase AT3G07070 40.052 3.42e-89 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vivi37g00006 PK_Tyr_Ser-Thr 3.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi37g00006 - - gsj:114400704 717.998