Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi37g00005 ATGATACAGTTATTTGATACAATTTGGTTTGGTATTATGAAGTGTTTTTCATTCCATTCTTGTAATAAGAAAGATGAACCAAAAGGGATGCAATCTGCGTCGGGCCGGTCGGACAGTTCGGCGTATGTTGATGTTGAAGGTAGAGGAGGTGGTTCTGAGTTGAATTCTCGGGAGGTTTCGGATAGTGGCAGTGTGGAATCTCTCAGGAGGAACGCGCCTCCGAATTTGTCCCAACGGCCGAGTAGCCTTAGAGTGTTTACTGTATCGGAACTGAAATCAGCCACCAAGAGTTTCAGTCGGTCGGTTATGCTTGGAGAGGGCGGGTTCGGTTGTGTCTATCAGGGTGTAATTAGAAGTGTAGATGATCCTTCTAAAAGAATTGAGGTTGCTGTTAAACAACTTAGTAAAAGAGGAGTGCAGGGGCATAGGGAATGGGTGACGGAAGTGAATGTTCTAGGCATTGTTGAGCATCCAAATCTTGTGAAATTAGTGGGATACTGTGCCGATGATGACGAAAGAGGAATCCAACGGCTTTTGATTTATGAATACATGCCGAACAAAAGTGTGGAACACCATTTATCTCACCGAGCAGAGACTCCTCTCCCGTGGAGTAGGAGATTAAAAATAGCACAAGACGCCGCTCGTGGATTAACATACCTGCATGAAGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCGAATATCCTTTTGGATGATCAGTGGAATGCAAAGCTATCAGATTTCGGATTAGCGAGACTGGGACCATCGGATGGACTAACTCATGTCTCAACAGCAGTTGTAGGAACAATGGGGTACGCAGCTCCTGAATATCTCCAAACCGGACGTCTCACATCGAAAAATGACGTATGGAGCTACGGCGTTTTCCTTTATGAGATCATTACTGGCAGACGCCCTTTAGATCGAAATCGCCCCAAGGGTGAACAGAAGTTGTTGGAATGGATAAAGCCGTACCTATCAGATACAAAGAAATTTCAACTGATATTGGATCCAAGACTTGATAAGAAACAAGTACTCAAATCAGCCCAAAGACTTGCTAATATAGCTAACCGTTGCTTAGTTAAAAACCCGAAGAATCGCCCGAAGATGAGTGAGGTTTTGGGAATGGTGAATGGAATAATGGAATCATCATCCGACGCTAATTCACTACTACCCTTGAAGAATGTTTCGAGAGTAGAAGTTTCTCAAGACGTTGAAACGAATAACGCGAAGAAACGGAGCATGGATCAGAAGTCTAGAGAAAGTAATTGGTTTTTTAAGATGTGGAGACCAAAGCTTTTAAGAACATGA 1317 0.429 MIQLFDTIWFGIMKCFSFHSCNKKDEPKGMQSASGRSDSSAYVDVEGRGGGSELNSREVSDSGSVESLRRNAPPNLSQRPSSLRVFTVSELKSATKSFSRSVMLGEGGFGCVYQGVIRSVDDPSKRIEVAVKQLSKRGVQGHREWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNKSVEHHLSHRAETPLPWSRRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDDQWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYLQTGRLTSKNDVWSYGVFLYEIITGRRPLDRNRPKGEQKLLEWIKPYLSDTKKFQLILDPRLDKKQVLKSAQRLANIANRCLVKNPKNRPKMSEVLGMVNGIMESSSDANSLLPLKNVSRVEVSQDVETNNAKKRSMDQKSRESNWFFKMWRPKLLRT 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi37g00005 438 SUPERFAMILY Protein kinase-like (PK-like) 75 378 IPR011009 -
Vivi37g00005 438 Pfam Protein tyrosine and serine/threonine kinase 103 376 IPR001245 GO:0004672|GO:0006468
Vivi37g00005 438 ProSitePatterns Protein kinases ATP-binding region signature. 104 132 IPR017441 GO:0005524
Vivi37g00005 438 CDD STKc_IRAK 104 382 - -
Vivi37g00005 438 FunFam Serine/threonine-protein kinase PCRK2 184 392 - -
Vivi37g00005 438 MobiDBLite consensus disorder prediction 26 79 - -
Vivi37g00005 438 PANTHER OS01G0588500 PROTEIN-RELATED 60 380 - -
Vivi37g00005 438 Gene3D Transferase(Phosphotransferase) domain 1 184 402 - -
Vivi37g00005 438 FunFam Serine/threonine-protein kinase BIK1 66 183 - -
Vivi37g00005 438 MobiDBLite consensus disorder prediction 55 79 - -
Vivi37g00005 438 Gene3D Phosphorylase Kinase; domain 1 71 183 - -
Vivi37g00005 438 ProSiteProfiles Protein kinase domain profile. 98 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi37g00005 13 394 Glycoside Hydrolase AT3G07070 40.052 8.07e-89 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vivi37g00005 PK_Tyr_Ser-Thr 3.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi37g00005 - - gsj:114400704 724.161