Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi37g00003 ATGCCACATTATACATTGCTTCATGATCAAGCAACATCTTCAAAAAATGTTGTAATGGAAATGAATCACATTTTATTCTTGTCCATTTATACCATCACAAATTTGCTACTACTACCTCATGTTCTATGTCTAGATCAAGGTAATTCTCTTGCACCTTCGTTTTTCACAAAGGAAATCTACAAACAGCTTGAAGGTCTCACTACCACTTTGACAAAAGATATCAAAGAAGATTTAGGTTTCTGCATAAAGGATGTGAACAAAGATTGGGAGGAAGCCTTTAATTTTAAGGGGAGATTGGATTTTGTGGAGGCTTGTGTTAAGCAAAAGGGTGATTTTACTGATAGAATTTGTACCACTGCTGAAATAAGGAACTACTTTCAGAGTTTTTTCTTAGAAGGAGGCACATCTGCGAGCTACGTAAAACCTAACAAAAATTGCAACTTGACTTCATGGGTTTCTGGTTGTGAGCCTGGTTGGAGTTGTAGTGCTGATGAGAAAATTGATCTCAAAAAGGATGTAAAGGATGTTCCTTCCAGAATCAATGACTGTCAACCATGTTGTGAAGGGTTTTTCTGTCCTCAAGGGTTAACTTGCATGATAACATGTCCACTTGGTTCTTATTGTCCACTTGCAAAACTGAATGAAACAACAGGAGTATGCGATCCATATAGTTATCAAATTCCTGCTGGAGACTCAAACCATACTTGTGGTAGTGCTGATATTTGGTCTGGTGTTGTGAACAATAGTAATATCTTTTGTTCTCCGGGATCATATTGTCCCTCTCCCACGCGCAAAGTTTCTTGCGATGAAGGACATTACTGCAGAATGGGTTCAACTCATCAAAATCCATGCTCCAAGTTGAGTAGCTGCAATCCAAACACATCGACCCAAAACATGCATGCTTATGGCGCTTTGATTATTGTTGGTATGAGTACTACTCTGATCTTCATTTATAACTGTTCTGATCAAGTTCTAGCTACTAGAGAAAGACGGCAGGCTAAATCGAGAGAAGCTGCAGCAAAACACGTAAGAGAAACGGTACAAGCTCGCGAGAGATGGAAACAAGCAAGAGAGTTGGCTAAGAAAGGTTCGGCGGGATTGCAAAAGCAGTTGTCTCGAACCTTTTCGCGCAAGAAATCCGGTAAGCCAGGCGAATTATTTCAACCAACGCCTCCAGATTCTTCAAGCAAACCAGGGCAAGCGTCGAAAGGCAAAAGTAAGGAACCTAGCGATCTTACTAAAATGATGCATTCCATTGAGGATGATGGACCTGAAGGACTTGATTTTCAGATTGGTGATAAGAACATTAAAAAGCAAATGCCGAAGGGGAAAAAATTACAAACTCATAGCCAAATTTTAAGGTATGCTTATGGTCAGATTGAGAAGGAGAAAGCTCAGCAAGAACAAAACAAGAACATGACGTTCTCGGGACTAATTTCGATGGCCTCTGAAGGCGAGGAAGTAAAATCAAGACCTTCGATTGAGGTAGCTTTCAATAATCTAACCCTTACTTTGAAAGGTAAAAACAAGCACATACTCAGGTGTGTGAGTGGTAAAATCATGCCTGGTCGAGTTTCGGCTGTTATGGGACCCTCAGGAGCTGGAAAAACAACATTTCTTTCAGCTTTGGCTGGAAAAGCAAGAGGGTGCAATCAGTCGGGATCAATTCTAGTTAATGGAGAAAACGTATCCATTCACTGTTATAAGAAAATTACTGGTTTTGTGCCACAAGATGATATTGTGCATGGAAACTTGACAGTAGAGGAAAATCTTCGTTTCAGCGCAAAATGCAGGCTCCCTGCAGAGATGGCGAAACCAGATAAGGTTCTGATAGTTGAAAGAGTGATTGAGTCCTTGGGGCTACAGCCAGTAAGGGATTCTCTAGTTGGGACGATAGAGAAGAGAGGCATATCCGGAGGACAAAGAAAACGTGTAAATGTTGGACTTGAGATGGTGATGGAGCCTTCATTATTAATCTTAGACGAACCTACAACTGGTTTGGACAGTGCATCTTCAAGTTTACTTCTTAAAGCGCTTCGCCGTGAAGCTCTTGAAGGTGTAAACATCTGCATGGTACTTCACCAACCAAGCTATACTTTGTTCAGAATGTTTGATGATATAGTATTTCTAGCCAAAGGTGGTCTCACAGCATATCATGGTCCTGTGAAAAAAGTGGAAGAATACTTTGCTGGCATTGGAATCCCGGTACCGGATCGTGTCAATCCTCCTGACCATTTCATTGATATTCTTGAAGGTTTAGAGAAACCAACTTCAGGTATAACTGTTGAAACACTTCCTGTGAGATGGATGCTTCATAATGGATATCCAGTACCAACAGATATGCTTCATTTGACCGATCAAATTGCCGCTCCTTCATCTGCTGCCTCAGATGCAACTAGCACGTCAAAGGGTACCGAGGAATCTTCTGATCAATCCTTTTTTGTAGAGTTTTGGGAGGATTTGAAGAGCAATATTAGGACGCAACGAGATCAAATAGAAGCAATATTCTCAAGAACAAAGGATTTGTCCGGCCGAGAAACTCCTAGTGTAGTCCATCAATATAGATACTTCGTTGGCCGGGTTGGCAAGCAGCAACTAAGAGAAGCAAAATTACAAGCAGTCGACTATCTCCTTTTATTGGTCGCCGGCGCTATCTTAGGAACTCTTACCAAAGTAAACGATGAAACATTCGGGTCCCTTGGTTATACATATACAGTCATTTCTGTTTCTCTACTTTGCAAGATTGCGGCTCTCAGATCATTTACTATGGATAAATTACAATACTGGAGGGAAAGTGCAGCTGGGATCAGTAGTCTAGCCCATTTTCTCGCAAAAGATACGATCGATCTTTTCAGTACAATCACCAAACCTGTAGTTTATCTCTCCATGTTCTTTTTTTTAAGTAATCCAAGATCAACCTTTGTAAGTAATTATTTAGTTTTGGTTTGTTTGGTGTACTGTGTCACCGGCATGGCTTATGCATTAGCCATCTTCTTTCAACCTGGTCCTGCTCAGCTGTGGTCCGTGCTTGTTCCGGTTGTTATGACTCTCATTTCCAACCAGACTAGAGATACTGCATTTATGAAGATCCTAGTACAGTTCTGCTATCCGAAATGGGCTTTGGAGGCTTTTATCATTGCAAATGCTGAAAGGTACACTGGGGTATGGCTGATAACTCGATGTAGTTCACTAAAGAGCGGTAGTTATAATGTCAACTCGTGGAACGCTTGTCTGCTTGTCCTCGTTTTGTATGGAATAATTGCCCGGGTTATAGCCTTCATTTGTTTGGTCATTTCCCAAAAGAGGTGA 3309 0.4104 MPHYTLLHDQATSSKNVVMEMNHILFLSIYTITNLLLLPHVLCLDQGNSLAPSFFTKEIYKQLEGLTTTLTKDIKEDLGFCIKDVNKDWEEAFNFKGRLDFVEACVKQKGDFTDRICTTAEIRNYFQSFFLEGGTSASYVKPNKNCNLTSWVSGCEPGWSCSADEKIDLKKDVKDVPSRINDCQPCCEGFFCPQGLTCMITCPLGSYCPLAKLNETTGVCDPYSYQIPAGDSNHTCGSADIWSGVVNNSNIFCSPGSYCPSPTRKVSCDEGHYCRMGSTHQNPCSKLSSCNPNTSTQNMHAYGALIIVGMSTTLIFIYNCSDQVLATRERRQAKSREAAAKHVRETVQARERWKQARELAKKGSAGLQKQLSRTFSRKKSGKPGELFQPTPPDSSSKPGQASKGKSKEPSDLTKMMHSIEDDGPEGLDFQIGDKNIKKQMPKGKKLQTHSQILRYAYGQIEKEKAQQEQNKNMTFSGLISMASEGEEVKSRPSIEVAFNNLTLTLKGKNKHILRCVSGKIMPGRVSAVMGPSGAGKTTFLSALAGKARGCNQSGSILVNGENVSIHCYKKITGFVPQDDIVHGNLTVEENLRFSAKCRLPAEMAKPDKVLIVERVIESLGLQPVRDSLVGTIEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTTGLDSASSSLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIVFLAKGGLTAYHGPVKKVEEYFAGIGIPVPDRVNPPDHFIDILEGLEKPTSGITVETLPVRWMLHNGYPVPTDMLHLTDQIAAPSSAASDATSTSKGTEESSDQSFFVEFWEDLKSNIRTQRDQIEAIFSRTKDLSGRETPSVVHQYRYFVGRVGKQQLREAKLQAVDYLLLLVAGAILGTLTKVNDETFGSLGYTYTVISVSLLCKIAALRSFTMDKLQYWRESAAGISSLAHFLAKDTIDLFSTITKPVVYLSMFFFLSNPRSTFVSNYLVLVCLVYCVTGMAYALAIFFQPGPAQLWSVLVPVVMTLISNQTRDTAFMKILVQFCYPKWALEAFIIANAERYTGVWLITRCSSLKSGSYNVNSWNACLLVLVLYGIIARVIAFICLVISQKR 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi37g00003 1102 Gene3D - 483 731 IPR027417 -
Vivi37g00003 1102 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 494 719 IPR027417 -
Vivi37g00003 1102 MobiDBLite consensus disorder prediction 356 427 - -
Vivi37g00003 1102 SMART AAA_5 522 714 IPR003593 GO:0016887
Vivi37g00003 1102 FunFam ABC transporter G family member 24 490 732 - -
Vivi37g00003 1102 CDD ABCG_EPDR 493 720 - -
Vivi37g00003 1102 MobiDBLite consensus disorder prediction 389 403 - -
Vivi37g00003 1102 Pfam ABC transporter 515 664 IPR003439 GO:0005524
Vivi37g00003 1102 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 496 737 IPR003439 GO:0005524
Vivi37g00003 1102 MobiDBLite consensus disorder prediction 407 427 - -
Vivi37g00003 1102 Pfam ABC-2 type transporter 694 1101 IPR043926 GO:0140359
Vivi37g00003 1102 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 257 1090 - -
Vivi37g00003 1102 ProSitePatterns ABC transporters family signature. 637 651 IPR017871 GO:0005524|GO:0016887
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi37g00003 474 716 Calmodulin-binding Proteins AT2G36910 25.806 9.18e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi37g00003 - - lang:109333797 1709.12