Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi378g00011 ATGTCTACATACAGTGAATCAACTTTGCATCTCGATAGTGACGGTGAAGAGGTGGAATTCACCAGTGTTAACGGTGATGGTAGTGATAGAGATACGTTAGAGAAAGAGGATTGTAATGGTCATAAATGTTTAAGTGAAGTTACAGATGAAGATATAAGAGCTATGGAATTTAGCACAGAGGAAGAAGCGATACAATTTTACATAACATATGCGCATTTCCATGGATTTGCGGTAAGGAAAGATGATGTTGTACGCGATCATGAAAGGAAAATTGTTGTCCGTCAATTACTTTGCAATAAAGAAGGAAAGAGTGAAAGAAAAAATAAGAAGAATGAGGATAAATATCGGCAAACTATGCGAACTGGCTGTCTTGCTAGATTTCGAGTAGCCTATGATTATGTTCGTAAGGTTTGGAGAGTTACTAAATTTGAGTCATCTCATAACCATGAATTAACTCCTGCACGTTTTATTCATTTGATTCCCAATTATCGTAAATTAAGTGAAGCGGATAAACAAGTTGTCAATGGTTTGCATTTGTCATACCCTAATTTTTGA 555 0.3586 MSTYSESTLHLDSDGEEVEFTSVNGDGSDRDTLEKEDCNGHKCLSEVTDEDIRAMEFSTEEEAIQFYITYAHFHGFAVRKDDVVRDHERKIVVRQLLCNKEGKSERKNKKNEDKYRQTMRTGCLARFRVAYDYVRKVWRVTKFESSHNHELTPARFIHLIPNYRKLSEADKQVVNGLHLSYPNF 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi378g00011 184 MobiDBLite consensus disorder prediction 1 33 - -
Vivi378g00011 184 Pfam FAR1 DNA-binding domain 65 152 IPR004330 -
Vivi378g00011 184 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 9 172 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi378g00011 FAR1 8e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi378g00011 - - vvo:131652578 353.599