Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi376g00024 ATGGCACCTTCTCGGGTGGCAGGAGGTTTAGCCCAATCATCATCAAGTTCTGGAATTTTCTTTCAAGGAGAGGGACAGTCGCATAATTTAGTTAACTCTCACTTGAGTTCATCTTTAGTTAACTCGTCTAATACTGTACCTGGAACTGGTCACTCCAACCTTGGTCCAGTTCCCGGGGATATGAATAATGCAATTTTGAACAGTGTTGCAAACTCAGCACCAAGTGTTGGAGCTAGTTCTCTAGTCACGGATGCAAATTCTGCACTCTCGGGTGACCGCCATATGCAAAGAAGTGCAAGCATTAATGGAGACTCGTACTTAAGATTACCTGCCTCGCCTTTGTCATTCACATCGAATAATATTAGTATTTCTGGGTCACCTGCAATGGATGGTTCATCTGTTGTACAGCAGAATTCTCATCAAGATCAGAATGCTCAACAATTGCAGCAGAATCAGCAGAAGCTTCAGGGTGGTTCAAGTTCTATGCATATGCCTGCTTCTCAAACTGGATCGTCTTCGCACCAAATGGGTGCACAAGTGGCAGGATCTTTCATTCAAGATCCAAATAGTATATCTCACTTGCTGAAAAAACGTAGGCTGGATATCAAACCAGATGATATAATGCAACAACAGGTAATACAGCAGCTTCTTCAGAGACAAGACCCCACACAATTCCAAGGACGGAATCCACAGTTACAGGCTATGTTTCAGCAACAGCATAGACTAAAGCAACAACAAATCTTTCAGTCATTGCCCCAGGCCCAGCGGATGCAATTGATACAACAACAGCAGCAACAGCAACAACAGCAGCAGCAACAAATGCAGAGGCAGCAAATACAACAACAAATGATGCAGCCCTCGGCTGGTGTGAAGCGTCCATATGATGGTGGTGTTGGAGGCGTATGTTCCCGTCGATTGATGCAGTACCTCTATCATCAAAGACAGCGACCAAGTGATAATAGTATTGCGTATTGGAGAAAATTCGTGGCTGAATATTATTCTCCTCGTGCAAAGCAACGGTGGTGCTTGGCATTATATAGTAATGCTGGACACCATACTGCTGGTGTTTTACCGCAAGCAACTACACATGCTTGGCACTGTGACATATGTGGAGCTAAATCTGGAAGAAGGGGATTTGAGGCAACTTTTGATATACTACCCAGACTTAACGTAGTCAAATTTGATGGTGGAGTGATCGATGAACTTTTGTTTTTGGACTTGCCACGCGAAATAAGATTTGCGTCTGGTTTGATGATGTTAGAATATACAAAAGCAGTTCAAGAGTGTGTGTATGAGCAGCTTCGTGTTGTTCGTGAGGGTCAACTTCGTATTGTATTTACTCAAGACCTAAAGATATTTTCTTGGGATTTCTGTGTAAGACGCCACGAAGAACTTCTTCCTCGAAAGTTAGTTGCCCCACAGGTCAACCAATTAGTTCAGGTGGCTCAAAAATGCCAAAGTACAATTTCTGAAAGTGGGTCAGACGGGGTATCTCAGCATGACTTGCAATCAAACAGCAACATGGTCCTAACTGCTGGGCGTCAGCTTGCGAAGAGTTTGGAGCTACAATCACTAAATGACTTGGGCTTTTCAAAAAGATTTGTGAGAACCTTACAGATTTCTGAGGTTTGCAATAACATGAAAGATCTAATTGATATCAGTTCTGATCAAGATATCGGAGCAATTGAGAGTTTGAAAAATTATTCTCAATTTTCAACCGCGTCAAAGCACCAAATGCAAAAGATGCAGGAGATGGAACAGGCAGCAAATGCTCAAGGTCTCCCATCTGATCGAAATACACTTAATAAACTGATGGCATTGAATCCTGGATCAAACAATCATATAACCAATAATCACAACAATATGGGCAATCGTGGTGCTTTGACTGGGCCATCACAAGCTGCTTTGGCAATGTCTAGCTATCAGAATATTCTCATGAGGCAAAACTCGATGAATTCAAGTCCTAGCTCACTTCATCGAGAAGGGTCCCCTTTCAATAACCCAAACCAAAGTCCCTCGTCAGCTTCTTTGCAAGGTGCTGGTGCTGCTGCTATAATCCCCGGCTCTTTGCAGAATTCACCTCACAACAGTAGTGGTGGTTTCTCAAATCAACATATATCCGCACAACAGCAGCGGCAACAACAACACCTTCAACAGCGCTCGTTAAGTGCGAATAATTTACCTCAACAAAATCACTCACAAGGTCCTCAAGGAAATCAATCACTGCAACAGCAGATGATCCAGCAACTACTACAAGATATGTCAAATAACAACGGCGGGGGAGTGCAACAACAGTCTCATAGTGGACCCAATGTAAGTGGGAATATGGCAAAGAATAATAATTTGGGTTTTGCGGGACAAACTCCACCCACAACCGGAGGAGGCGGCGGCTCTACCAGCGGTCCAGCAAATAACGGACCTGTTTCAAGGAGTAATAGCTTCAAAGCAGCTTCAAACAGTGATTCTTCTGCAGCAGCTGGTGGAGGAAGCAACACAGGATTCAACCAGAGATCATCTGACATGCCACCGCAGAATCTTGCATTGCAAGACATAGCTTCCGATTTCGCCAATGATTTTGCTGATAACCCCTTCTTTAACAGTGATCTAGACGATAGCATGGGTTTTAACTGGAAGACATGA 2640 0.436 MAPSRVAGGLAQSSSSSGIFFQGEGQSHNLVNSHLSSSLVNSSNTVPGTGHSNLGPVPGDMNNAILNSVANSAPSVGASSLVTDANSALSGDRHMQRSASINGDSYLRLPASPLSFTSNNISISGSPAMDGSSVVQQNSHQDQNAQQLQQNQQKLQGGSSSMHMPASQTGSSSHQMGAQVAGSFIQDPNSISHLLKKRRLDIKPDDIMQQQVIQQLLQRQDPTQFQGRNPQLQAMFQQQHRLKQQQIFQSLPQAQRMQLIQQQQQQQQQQQQQMQRQQIQQQMMQPSAGVKRPYDGGVGGVCSRRLMQYLYHQRQRPSDNSIAYWRKFVAEYYSPRAKQRWCLALYSNAGHHTAGVLPQATTHAWHCDICGAKSGRRGFEATFDILPRLNVVKFDGGVIDELLFLDLPREIRFASGLMMLEYTKAVQECVYEQLRVVREGQLRIVFTQDLKIFSWDFCVRRHEELLPRKLVAPQVNQLVQVAQKCQSTISESGSDGVSQHDLQSNSNMVLTAGRQLAKSLELQSLNDLGFSKRFVRTLQISEVCNNMKDLIDISSDQDIGAIESLKNYSQFSTASKHQMQKMQEMEQAANAQGLPSDRNTLNKLMALNPGSNNHITNNHNNMGNRGALTGPSQAALAMSSYQNILMRQNSMNSSPSSLHREGSPFNNPNQSPSSASLQGAGAAAIIPGSLQNSPHNSSGGFSNQHISAQQQRQQQHLQQRSLSANNLPQQNHSQGPQGNQSLQQQMIQQLLQDMSNNNGGGVQQQSHSGPNVSGNMAKNNNLGFAGQTPPTTGGGGGSTSGPANNGPVSRSNSFKAASNSDSSAAAGGGSNTGFNQRSSDMPPQNLALQDIASDFANDFADNPFFNSDLDDSMGFNWKT 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi376g00024 879 PANTHER LIM DOMAIN-BINDING PROTEIN 41 843 IPR029005 -
Vivi376g00024 879 Pfam LIM-domain binding protein 305 566 IPR029005 -
Vivi376g00024 879 MobiDBLite consensus disorder prediction 689 721 - -
Vivi376g00024 879 MobiDBLite consensus disorder prediction 754 844 - -
Vivi376g00024 879 MobiDBLite consensus disorder prediction 38 59 - -
Vivi376g00024 879 MobiDBLite consensus disorder prediction 650 721 - -
Vivi376g00024 879 MobiDBLite consensus disorder prediction 650 678 - -
Vivi376g00024 879 MobiDBLite consensus disorder prediction 608 630 - -
Vivi376g00024 879 Coils Coil 257 282 - -
Vivi376g00024 879 MobiDBLite consensus disorder prediction 122 178 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi376g00024 290 568 C2H2 Transcription Factor Family AT1G43850 54.480 5.45e-99 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi376g00024 - - gmx:100816886 1056.2