Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi375g00004 ATGGAAGATAAAGGATGGAATCACTATGATCATGACCCTCTTCTTCTCACTGACGCTTCTTTTCATCAACAGCAACCAGAATCCATTTCCACTGGGGTTTTACAAACATCTAAATTGAATTCAGCTATGGCGACTGATCCTCAATCTTGTGGATTGTCTCGGGAAAATGAAATCTCCGAACGGGGTAGTGTGCAATTCGATGATCCAATTGTGAAAAGTTTGGTTGATGATGATCCAATTGTTTCGGAACGGTCGATATTAGGGTTTTCGATGACTTCACCGGATCTGGTGGTCTGTTCTGGCTCACCGGATATTGCTGGAATCAGTTATTGTGACTCTCCGGTGATGTTGAAGAGCAAAAATTGCTGTAATTTGGATTCATCTATGGAGCTTTCTTTTGAGAATGGGATCGACGAGTCTGAAGTTGAAGTTGTTTCTAAAGTTCGTAAGACTCCAATGGTTAAATTCTCGAATGTGTGTCAAACTTTTGAACCGGAAGAGGAATTACTATCACCTGAAGCCTCCTTTGAGCTTCGTCAACCGCCGGTAACTAAAGTCGAGTCACTGCAAGACTGCTCTCCCGGAGATAATGAAATGACGGAAGACACTGGAGAGTCTCAGGAAGCAGAGTTGGAGTTCTCACAAAGTGTTGGAGTAGAAGAGAAGTTTCTGAAGCTGAAAAGAGATTTCGAGTGTCAGACGAAAGAGCTGGCAGTAACAAAGAGGGAGTTGTGGGAGCTCAAGAAGGAGAATCATAAAAAACGTACTGAATGTCAAGAAGCTTTGAACTCCTTAAAGGAGCTTCAGGACGAGCTAATGCGCAAGTCGATGCACGTAGGGTCTTTAGCATTTGCTATTGAGGGACAAGTGAAAGAGAAAAGTAAGTGGTTTACAACACTGAGAGACATGACGAGAAGATTGAAGATTATGAAAACGGAACATATTAAGCTATTAGAAGAAGCGGAGGCATACAAGAAATATGAAGCAGATATAAGCGAATTGGGGCGCGTTATCAAGTCTAAAATGAATGAACAACTAGAGTTAAATGAAGATCTCAAGTCCAAATATATAGAAGGGACTAAGATTCAAAAAGAGCTTTACAATAAGGTATTAGAGTTGAGAGGAAACATAAGGGTCTTTTGCCGGTGTAGGCCACTCAATGCCGAAGAGATCAAAGGAGGAGCCACAGTGGCCTTAGATTTTGATTCTTCTAAAGAGGGCGAGCTTACTGTTCTGTCAAACGGATCTTCGAAAAAGACTTTTAAATTTGATGCTGTCTTTGGCCCTCAAATTGAACAAGCTGATATCTTTGAAGACACTATACCATTTGCAACCTCGGTTTTAGATGGATACAATGTATGCATTTTTGCATACGGACAGACTGGTACAGGAAAAACCTTCACAATGGAGGGAACAGAAGAGGCTCGTGGAGTTAATTTCAGGACTCTAGAGAAAATGTTTGATATAATCAAGGAAAGACAAACCCTCTACAGTTATGATATCTCCGTAAGTGTCTTGGAAGTGTACAATGAGCAAATAAGAGATTTGTTGGTTTCAGGAAATCATCCAGGAATGTCTGCAAGACGATTGGAGATAAGGCAAGCTGGTGAAGGAATGCATATTCCAGGTTTGGTTGAGGCACATGTGAACAACATGACTGAAGTGTGGGATGTCCTACAAACTGGTAGCAATGCAAGGGCTGTAAGCTCAACCAATGCGAACGAGCATAGTAGTCGATCTCACTGCATTCACTGTGTCATGGTTAAGGGAGAAAATTTGTTGAATGGAGAACACACTAGAAGCAAGTTATGGCTTGTGGACCTAGCTGGCAGCGAAAGGGTTGCAAAGACAGAAGTACAAGGTGATAGATTGAAGGAGACACAAAATATTAATAGGTCTCTTTCTGCACTTGGCGATGTCATTTCAGCTCTCGCAACTAAAAGTTCACACATCCCTTTCAGGAACTCCAAGCTTACACACTTGCTGCAAGACTCATTAGGAGGAGATTCAAAGGCACTCATGTTTGTACAAATCAGTCCTAATGAAAATGATTTGAGCGAAACGATTTGCTCTTTGAACTTTGCTAGTAGAGTAAGAGGAATAGAATTGGGCCCGGCAAAAAAACAGTGGGACACCATTGAACTTCTGAAACACAAACAGATGGCTGACAAAACTAAACAAGAGCTAAAACTTAAGGATTTTCAAATCAAGAAGATGGAGGATACAATCCATGGATTAGAGTTCAAAATGAAGGAAAGGGATCATAAAAACAAAAGTCTTCAAGACAAGGTGAAGGAACTGGAATCACAGCTTATGATTGAGAGAAAGCTAGCGCGTCAACATGTAGACTCAAAGATAGCTGAGCAGCATCAAATGAATCAAGAGCAAAACAATTCAATTTTAAGACCAACACCACTCGCGAATCGACCATTAGCAACTCTCAAGAATTGTAACGATCCAACAAGTGGCGGAAATTCAGCTAGACCCTTAATGGAGAACATCATCTCAAAACCTTACAATATACCCTTTTCTACAATAGAAAGCTCCATCAAGTACATTGATCAGAACGAGAAAGAAAACAATCCTGACATGGCCGATAACAAGTCGCTACTTCCAAAAAGGACAGCAAGAGCTTCTTTATGCACAATGACACCGCGAGGCATTCCGTCTGCAACTACTTCAAGGAGGAACTCTCTGATTCCTCTCCCAAGTTTAACACATTTTCAAACACCATTCATACCAAAGTTAACAAACCAAGATGTCATCGAGGAATCAAAAACAATGCAACCATTACAAGGTCATTGCGAGAGTCCTAAAGAAGTGAAAAGCGGTGTTAAGAAGATCGGGAGCATATTAAGAAGAAGCACACACAGAAAAGGTCAGGTGAAGTCTCCACTACAACATATGAGAAAAGTTGGTGGTGTAAATGTAGGAATGGAGAAACTGAGAGTTTCTATTGGAAGTAGAGGGAAATTGGCACAAAGAGGGGTGCAAGCTGGAAATGGCAGAAGAGGTGGAGGTGCTAAAGAACAGAAGAATAGTCATAAGGACAAGGAAAGGGGATGGATATAA 3072 0.4115 MEDKGWNHYDHDPLLLTDASFHQQQPESISTGVLQTSKLNSAMATDPQSCGLSRENEISERGSVQFDDPIVKSLVDDDPIVSERSILGFSMTSPDLVVCSGSPDIAGISYCDSPVMLKSKNCCNLDSSMELSFENGIDESEVEVVSKVRKTPMVKFSNVCQTFEPEEELLSPEASFELRQPPVTKVESLQDCSPGDNEMTEDTGESQEAELEFSQSVGVEEKFLKLKRDFECQTKELAVTKRELWELKKENHKKRTECQEALNSLKELQDELMRKSMHVGSLAFAIEGQVKEKSKWFTTLRDMTRRLKIMKTEHIKLLEEAEAYKKYEADISELGRVIKSKMNEQLELNEDLKSKYIEGTKIQKELYNKVLELRGNIRVFCRCRPLNAEEIKGGATVALDFDSSKEGELTVLSNGSSKKTFKFDAVFGPQIEQADIFEDTIPFATSVLDGYNVCIFAYGQTGTGKTFTMEGTEEARGVNFRTLEKMFDIIKERQTLYSYDISVSVLEVYNEQIRDLLVSGNHPGMSARRLEIRQAGEGMHIPGLVEAHVNNMTEVWDVLQTGSNARAVSSTNANEHSSRSHCIHCVMVKGENLLNGEHTRSKLWLVDLAGSERVAKTEVQGDRLKETQNINRSLSALGDVISALATKSSHIPFRNSKLTHLLQDSLGGDSKALMFVQISPNENDLSETICSLNFASRVRGIELGPAKKQWDTIELLKHKQMADKTKQELKLKDFQIKKMEDTIHGLEFKMKERDHKNKSLQDKVKELESQLMIERKLARQHVDSKIAEQHQMNQEQNNSILRPTPLANRPLATLKNCNDPTSGGNSARPLMENIISKPYNIPFSTIESSIKYIDQNEKENNPDMADNKSLLPKRTARASLCTMTPRGIPSATTSRRNSLIPLPSLTHFQTPFIPKLTNQDVIEESKTMQPLQGHCESPKEVKSGVKKIGSILRRSTHRKGQVKSPLQHMRKVGGVNVGMEKLRVSIGSRGKLAQRGVQAGNGRRGGGAKEQKNSHKDKERGWI 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi375g00004 1023 MobiDBLite consensus disorder prediction 1008 1023 - -
Vivi375g00004 1023 Gene3D Kinesin motor domain 371 744 IPR036961 -
Vivi375g00004 1023 ProSiteProfiles Kinesin motor domain profile. 376 701 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi375g00004 1023 Pfam Kinesin motor domain 382 701 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi375g00004 1023 Coils Coil 750 777 - -
Vivi375g00004 1023 SMART kinesin_4 374 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi375g00004 1023 ProSitePatterns Kinesin motor domain signature. 601 612 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vivi375g00004 1023 Coils Coil 300 320 - -
Vivi375g00004 1023 PANTHER KINESIN-LIKE PROTEIN KLP-3 191 857 IPR027640 GO:0003777|GO:0007018
Vivi375g00004 1023 Coils Coil 251 278 - -
Vivi375g00004 1023 PRINTS Kinesin heavy chain signature 450 471 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi375g00004 1023 PRINTS Kinesin heavy chain signature 571 588 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi375g00004 1023 PRINTS Kinesin heavy chain signature 651 672 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi375g00004 1023 PRINTS Kinesin heavy chain signature 602 620 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi375g00004 1023 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 376 738 IPR027417 -
Vivi375g00004 1023 CDD KISc_C_terminal 374 703 - -
Vivi375g00004 1023 FunFam kinesin-like protein KIN-14R 321 703 - -
Vivi375g00004 1023 MobiDBLite consensus disorder prediction 987 1023 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi375g00004 351 707 Calmodulin-binding Proteins AT5G65930 43.923 1.41e-77 276