Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi375g00003 ATGTCAGCCATGGCTGAACCAGAAGCGAACAACGAAGATGATGATTACATGGGTGACCTTTCTAGGTTTCTTCCTTGCGATTCTATTCAACCTCCAAATCCAAACACTTGTTCAAAAAAGATTTCTGACAAGAAAGGTCCTTCAATAAACTCTTCCAAGAGCCAATTCAAAGCTCTAAACTGGCAAGAACGGCGAAAAATTGAAAGAGAGAGGAAGCAAATACAAGAGGATGAACAAACATTAGCAAAAGTGGAAGCTCCAATACCACAATCCAACATTGGGTTTAAGCTTCTCCAAAATATGGGTTATACTCCAGGTTCCGCACTTGGCAAGGAGGGCTCAGGACGGGCTGAACCGGTCGGGATTGAAATTCGACGCTCACGAGCCGGTATAGGCTTAGAGGATCCTCATAAGGAAAAGAAGAAAAGGGAGGAAATCACAATCCATAGGAAAAGGAAGAATGAGGAGGCTCTGATGGAAGAATTTGGGTCTAGGCAGAAATCGCGTTGGAAGAGTAGGAGAGTTATTGTTAATTTTAATAAGGCTAAGGCTGCTCTTGACCAATTGGAGAATCGGGAAATTGTGGAGCCACCAAAGAACGAGGATGATGCCGAGGGTGAAGATGAAGAAGAGGAAGAAGAAATAACAGAAGAGGACTTGCTCGATGTTTTGATGAAACTGAGGGACGAGTTCAATTACTGCCTCTTCTGCGGATGTAAATATGAATCAAGTTCTGCTCTCTTGGATAACTGCCCTGGAATCAATGAAGATGATCACTGA 780 0.4321 MSAMAEPEANNEDDDYMGDLSRFLPCDSIQPPNPNTCSKKISDKKGPSINSSKSQFKALNWQERRKIERERKQIQEDEQTLAKVEAPIPQSNIGFKLLQNMGYTPGSALGKEGSGRAEPVGIEIRRSRAGIGLEDPHKEKKKREEITIHRKRKNEEALMEEFGSRQKSRWKSRRVIVNFNKAKAALDQLENREIVEPPKNEDDAEGEDEEEEEEITEEDLLDVLMKLRDEFNYCLFCGCKYESSSALLDNCPGINEDDH 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi375g00003 259 Pfam Domain of unknown function (DUF4187) 207 259 IPR025239 -
Vivi375g00003 259 MobiDBLite consensus disorder prediction 189 216 - -
Vivi375g00003 259 MobiDBLite consensus disorder prediction 28 55 - -
Vivi375g00003 259 MobiDBLite consensus disorder prediction 200 216 - -
Vivi375g00003 259 Pfam G-patch domain 90 133 IPR000467 GO:0003676
Vivi375g00003 259 ProSiteProfiles G-patch domain profile. 90 136 IPR000467 GO:0003676
Vivi375g00003 259 MobiDBLite consensus disorder prediction 1 55 - -
Vivi375g00003 259 SMART DUF4187_2 205 259 IPR025239 -
Vivi375g00003 259 PANTHER UNCHARACTERIZED 11 259 IPR039249 -
Vivi375g00003 259 SMART G-patch_5 88 134 IPR000467 GO:0003676
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi375g00003 82 132 C2H2 Transcription Factor Family AT5G26610 45.098 4.31e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi375g00003 - - tpra:123896801 422.165