Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi374g00002 ATGGCATCCATTGCTACTTTCTTCAACAAGTTTTGCTATCTTTTCATCCTCATTCTCCACCTTGGCTGCTTCATGTTCACCACCGCCGCCATCACCGGAAAACAAAAACACGACACCCGCCATTTGTTACCATCCAAGAAACGAAAAATCTTACCTTTATCACAACCCTCTTCACCTTCCCACCCTAAATTCAAAACCCACAAAGCCCTTTCTTCGTCTTGGCATTTCGTCAAACACCTCTTCTCCGCTAAATCCTGCAAAACCGCCATCACTGCCGCCACCACACATGCATCACCTCAATCCACATCAACCACCGCAAAAGCCTCCCAACAGACTCTCATCTCACTGGTTCAATCCGACCCGAGTTTCACGGATCCCCCACGCAAGAAACAACCCGAATCAGAAATCTCCGCCGACAACAATAACCTCTTCTTCCCCCTCCGCAACGACATCTACCCATGCACCGTCTGCGGCGAGATTTTCCAGAAACCAAACCTCCTCGAGAGTCACCAATCCACAAACCACGCCGTATCGGAACTCACCGGATCCGACCCGGGTCACAATATAGTCCAAATCATATTCAAATCGGGTTGGCCCGAAGCAAACGAGTTTCCATTTCCAACTATTCACCGAATCCTAAAGATCCACAACAGCCAGAAAATCCTCTCCAAATTCGAAGAATATCGCGAATCCGTAAAATCCAAAGCCACGCGTAACACGCGCCGCCGCGACGAACGCTGCATCGCCGATGGTAACGAACTCATGCGTTTCCACTGTTCCACGTTTCTATGCGAGTTAGGACATAACGGGGATTCTTCAATTTGTTCTCAGCAATTTTGTAATATCTGCGGAATTATTAAATCAGGATTTTCACAAAAATTAGATGGAATTTCCACGCTGTCAACAAGCTGGAGGGCAAACATGTCAATTCCCGATGACATCGAACGTGAATTTCGCTTCATGAATGTGAAGCGGGCCATGCTTGTTTGTCGGGTTATTGCGGGTCGGGTTGGGTCCGATTCGGATGATGAGATGGATAAAACTGATGGGGGTTTTGATTCGGTGATGGCGCATGGAGAGAGTGAGTTGGTGGTTTTTAATCCTAGGGCTGTGCTTCCTTGTTTTGTGATTGTGTATAGTGTGTGA 1146 0.4756 MASIATFFNKFCYLFILILHLGCFMFTTAAITGKQKHDTRHLLPSKKRKILPLSQPSSPSHPKFKTHKALSSSWHFVKHLFSAKSCKTAITAATTHASPQSTSTTAKASQQTLISLVQSDPSFTDPPRKKQPESEISADNNNLFFPLRNDIYPCTVCGEIFQKPNLLESHQSTNHAVSELTGSDPGHNIVQIIFKSGWPEANEFPFPTIHRILKIHNSQKILSKFEEYRESVKSKATRNTRRRDERCIADGNELMRFHCSTFLCELGHNGDSSICSQQFCNICGIIKSGFSQKLDGISTLSTSWRANMSIPDDIEREFRFMNVKRAMLVCRVIAGRVGSDSDDEMDKTDGGFDSVMAHGESELVVFNPRAVLPCFVIVYSV 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi374g00002 381 ProSitePatterns Zinc finger C2H2 type domain signature. 154 175 IPR013087 -
Vivi374g00002 381 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 72 379 - -
Vivi374g00002 381 ProSiteProfiles Zinc finger C2H2 type domain profile. 152 180 IPR013087 -
Vivi374g00002 381 MobiDBLite consensus disorder prediction 117 137 - -
Vivi374g00002 381 Gene3D - 177 380 - -
Vivi374g00002 381 SUPERFAMILY ADP-ribosylation 178 380 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi374g00002 74 381 C2H2 Transcription Factor Family AT2G29660 50.152 2.69e-104 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vivi374g00002 None None None