Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi373g00006 ATGGAGTTCAACCTTGAAAACCCTCTAGAAAACTTTCATGACCTTCCTAATTCTCAATGTGTTTCTTCCCTTTTCCTCATTGAATCTGACCATATCCCTCCACCAAGTTACTTTCAAAGCCTCAAATCAAATGAGTTTGATACCTCACTTAGAACTGATTTCATCTCTCTGATCTCACAGTTGTCATGCAACTTTGATTCGTTTGTGACTTACCTAGCTATCAACTATTTGGATCGCTTTCTAGCTAACCAAGGAATTTTGCCAAAACCATGGGCCAACAAACTTGTTGCAGTAACATGTTTTTCACTAGCAGTAAAAATGTTGAAAACAGAATACTCTGCCACTGATGTTCAGGGTCTTCTGAATCATGATGATGGTGGTTTCATTTTTGAGACACAAACAATAAAGAGAATGGAAGCACTTGTGTTAGGAGCATTACAATGGAGAATGCGTTCTATTACTCCATTCTCTTTCATTCCTTACTTCACCAATTTGTTTAATCTTGATGATATAACATTGAAGGTTCTCAAAGATAGAGCTTCTCAAATTATATTCAAGTCACAAAAAGATGTAAAGGTTTTGGAATTCAAGCCATCTATAGTTGCTGCTTCATCTCTTCTTTATGCTTCACATGAATTGTTTCCTTTTCAATATCCATGCTTCTTGGGAACAATATCCAATTCTTCATATGTAAATAAAGAAAGTGTGATGCAGTGCTATAATGTAATACAAGAGATATATAAGGAAGAGTACGAATCAATGTTTAATGCAAACTCAAGTTCAGGCACACCAGTTAATGTGTTAGACGAGAATTTTCTAAGTTTGGAAAGTGAAAAAACCAATGGAACAAATCTTGATCCAACTGCTATGATACAAGAGAAGCATTTCAAAAGAAGGAAAATTTAA 906 0.3499 MEFNLENPLENFHDLPNSQCVSSLFLIESDHIPPPSYFQSLKSNEFDTSLRTDFISLISQLSCNFDSFVTYLAINYLDRFLANQGILPKPWANKLVAVTCFSLAVKMLKTEYSATDVQGLLNHDDGGFIFETQTIKRMEALVLGALQWRMRSITPFSFIPYFTNLFNLDDITLKVLKDRASQIIFKSQKDVKVLEFKPSIVAASSLLYASHELFPFQYPCFLGTISNSSYVNKESVMQCYNVIQEIYKEEYESMFNANSSSGTPVNVLDENFLSLESEKTNGTNLDPTAMIQEKHFKRRKI 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi373g00006 301 SUPERFAMILY Cyclin-like 19 150 IPR036915 -
Vivi373g00006 301 SMART cyclin_7 52 144 IPR013763 -
Vivi373g00006 301 SMART cyclin_7 157 245 IPR013763 -
Vivi373g00006 301 FunFam D6-type cyclin 148 241 - -
Vivi373g00006 301 CDD CYCLIN_AtCycD-like_rpt2 153 243 - -
Vivi373g00006 301 Gene3D - 34 151 - -
Vivi373g00006 301 SMART Cyclin_C_2 153 267 IPR004367 -
Vivi373g00006 301 Gene3D - 23 241 - -
Vivi373g00006 301 FunFam D6-type cyclin 34 147 - -
Vivi373g00006 301 Pfam Cyclin, C-terminal domain 153 251 IPR004367 -
Vivi373g00006 301 Pfam Cyclin, N-terminal domain 27 150 IPR006671 -
Vivi373g00006 301 SUPERFAMILY Cyclin-like 135 248 IPR036915 -
Vivi373g00006 301 PANTHER CYCLINS 30 252 IPR039361 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi373g00006 1 280 Core Cell Cycle Gene Families AT4G03270 46.259 4.28e-75 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi373g00006 K18812 - gmx:100799951 448.358