Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi373g00002 ATGGGAAGATCACCTTGTTGTGAAAAAACTGGACTCAAGAAAGGTCCATGGACACATGAAGAAGATCTTTTGCTTATCAACTATATTAATTCTCATGGAGCTGGAAATTGGCGCAACCTCCCCAAAAATGCTGGTCTTCAAAGATGTGGCAAGAGTTGTCGGCTTCGTTGGACTAATTATTTGAGACCTGATATCAAGAGAGGAAGATTCTCGTTCGAAGAAGAAGAAGCCATCATTCAACTCCATAGTGTCATGGGAAACAAATGGTCGGCTATAGCGGCAAGATTACCCGGGAGAACAGACAATGAAATAAAGAACTACTGGAACACGCACATTAGGAAAAGACTACTTCGAAGTGGAATCGACCCGGTGACTCATACACCGCGTCTTGATCATCTATTCGACATGTCCTCCATTAATATTCTCAGATCAGCTATATTAGGATCCAACCCATCATTTCTGAATCTATTAGGTGGTGCTCAAGCTATGATGAATCCGGAATTGTTAAAACTAGCTGCAACTGCCACACTATTAAACAACAACAACAGCAACAACAACATGAATTTGGTTTCACAGAATCAGCAACAGTTCAATAATGTTGCTAATTATTCTACTCAACAACAAGTACAAAATAATCAAGTTTCTTTACAAGATCAGTTTCAAATACCAAATCAAACTCACAACAATATTATCACTAGTTCAAATTCAGCTGAAAATTCAAATCCTTGTTATTTTGGAGAAGATTTGATTTCTAAACAATATTCAGAACTGTTTCATTGTCTTAACAATGGAAACAATGAAAATATGGGATACGAATCGCTTATATCATCTACGCCTTTATCGACGACACCAACACCGACACCAACACCAACACCAACACCATCATCAACTTATGTGAATAGCTGCACAGAGGAGGAGAGGGATACATATTGCAGTGACATATTCAAGTTTGAAATTCCAGAGGGTAGTTTGGATATTAATGATTTCTTGTAA 993 0.3797 MGRSPCCEKTGLKKGPWTHEEDLLLINYINSHGAGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEEAIIQLHSVMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRSGIDPVTHTPRLDHLFDMSSINILRSAILGSNPSFLNLLGGAQAMMNPELLKLAATATLLNNNNSNNNMNLVSQNQQQFNNVANYSTQQQVQNNQVSLQDQFQIPNQTHNNIITSSNSAENSNPCYFGEDLISKQYSELFHCLNNGNNENMGYESLISSTPLSTTPTPTPTPTPTPSSTYVNSCTEEERDTYCSDIFKFEIPEGSLDINDFL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi373g00002 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Vivi373g00002 330 CDD SANT 69 112 IPR001005 -
Vivi373g00002 330 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 242 - -
Vivi373g00002 330 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Vivi373g00002 330 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Vivi373g00002 330 CDD SANT 16 61 IPR001005 -
Vivi373g00002 330 SMART sant 66 114 IPR001005 -
Vivi373g00002 330 SMART sant 13 63 IPR001005 -
Vivi373g00002 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Vivi373g00002 330 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Vivi373g00002 330 MobiDBLite consensus disorder prediction 275 300 - -
Vivi373g00002 330 Gene3D - 13 66 - -
Vivi373g00002 330 FunFam Transcription factor MYB39 69 130 - -
Vivi373g00002 330 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Vivi373g00002 330 Gene3D - 69 116 - -
Vivi373g00002 330 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Vivi373g00002 330 FunFam MYB-related transcription factor 13 66 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi373g00002 1 330 MYB Transcription Factor Family AT4G21440 46.438 5.12e-97 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vivi373g00002 Myb_DNA-binding 5.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi373g00002 K09422 - gmx:102668351 384.03