Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi371g00014 ATGAGTTTTAGCAACTGTGGATATTTGTTTTCTGTTTTGTTCATTTCGTGTTTGTATTTGCTACTACATGTTAGTACTGGTATAGACACGATCACATCGGCTTCATTTATCAAGGACCCTGAAACTCTAATCTCCAAAGATGGTAACTTCACCTTGGGGTTCTTTAGCTCAAAAAACTCAACAAATCGATACGTTGGTATTTGGTGGAAGTCTCAATCTACAATCATATGGGTGGCAAACAGAAACCAGCCGCTGAATGATTATAACGGGATTGTCACAATATCTGAAGATGGCAATCTTGTGATATTAAACGGACAGAAACGCGTTTATTGGTCATCAAATGTTTCCAACACAGCATCCAATACAACTTCACAGTTTTCAGACTTTGGTAACCTCGTCCTTTTGGAGAGCACGACGAGAAACATCTTATGGCAGAGTATTCAGCAACCTTCAGATACATTACTGCCTAGCATGAAACTTTCAATCGACAAAAGGACAGGTAAGAGTGTAAATCTCAAATCATGGAAAAGTCGTTTTGATCCATCCGTTGGTATTTTCTCTTCTGGTACTGTTGAACGCCAACATATAATTGAAGTGTTCATTTGGAAAGAAACACAGCCACACTGGCGCAGCGGTCCCTGGAATGGGGGAGTCTTCACTGGGATACAGGCAATGACAGTTGCATACTTTTTTGGTTTTCAAGGCGGGGACGATGGAGAAGGGAATATTATTGTATACTACACAATACAGAATGACGGAGAATTTGTTTTCTATCACCTGAATTCTGAAGGAATATTAGAAGAAACACGGTGGGATGATGAAAAGAAAGAAGTTCGCGTTACATGGACAAGCCGAGACTCAGCGTGTGATGTTTATAGTATATGTGGGGCATTTTCAAGCTGTAGTTCCTTGAATTCACCAATATGCAGCTGTTTGAGAGGATTTGAACCAAGAAACATACTTGAATGGAATCGAAACGACTGGACTGGCGGGTGTGTTAGGAGAACCCCTTTGCAGTGTGAAAGGGTCAACAATAAAACGAAAAGTAGAAAGGAAGACGGGTTTTTGAAACTACAGATGATTAAAGTTCCAGATTTTGCTCAAGGTTCAACTGTTACACCAGATATATGCAGAAGCCTATGCTTGGAGAATTGCTCTTGCCTTGCATATTCTCATGATGATGGGATTGGCTGCATGTCTTGGACCCGAAATCTACTCGACATACAACAACTCCAAACTGGAGGACTTGATCTGTATGTTCGCGTAGCCAACGCAGAACTTGATCGAGGGAGAAACAAGACAATCATCATTATAAGCACAACAATAATTGGAACTCTCGTAATTTTCATTTGTGCATATATCATATGGAGAAGAAGATCAAACCAACCAGCTAGACTGTGGCACTTTATTAATTCAGTAAGGGAAAATAACAGCAAACCTTTCCAACTATCTAATAAATGTGGGGCACCAGAAAGTTATACTAGTGACAACAGAATTGGAGAAATGCCTCAAGGTAAACTGCAAGAGCTATTAATATATGATTTTGAAAAGCTTGCAACCGCCACAAACAGCTTTCACTTGTCCAATAAACTTGGACAGGGTGGTTTTGGCACAGTATACAAGGGGAAACTGCAAGATGGTCAAGAAATTGCAGTTAAAAGACTTTCTAGTGCATCTAGACAAGGGTTGGAGGAATTCATGAATGAAGTGGTAGTGATTTGTAAGCTTCAACACCGCAATCTTGTAAGACTTCTTGGCTGTTGTATTGAAGGCGATGAGAAGTTGTTGATGTATGAGTACATGCCAAACAAAAGTTTGGATGCATTCATCTTTGATCCATTCAAAAATAAACTACTAGATTGGAGGACACGATATAGCATTATTGAAGGAATTGCTCGAGGATTGCTATATCTTCATAGAGATTCGAGACTAAGAATTATTCATAGAGATTTGAAGGCAAGTAATGTCTTGTTAGACGAGGAGCTTAATCCAAAAATATCAGACTTTGGAATGGCTAGAATCTTTGGAGGGGGAGAAGATCAGGTCAATACCTGCAGGATTGTTGGAACCTATGGCTATATGTCTCCTGAATACGCAATGCAAGGATTATTTTCAGAGAAATCAGATGTTTTTAGTTTTGGTGTTTTGTTACTAGAGATTGTTACCGGGAAAAGAAACTCAAATTTCTATGACAATGAGCATGGCCAAAGCCTTTTAGGATTTATTTGGACGCAATGGATGGAAAACAATATTTTATCTCTAATAGATCCAGAAATATATGATTCCAGTCATCATAACTACATTTTAAGGCACATACATATAGGACTTTTATGTGTACAAGAACTTGCTGCAGATAGGCCCTCTATGGCTGCAGTAATTTCTATGCTCAACAGTGAAGCTGCATTATCTCCTCCTTCTAGTAAACCTGCATTCATCCTGATGAAGAATCTGTTGAATTCAAAGTGGCCTGAAGAATGTCAAAGTGTTTCTTCCATCAATAATGTCAGTGTTACAGATGTCTGTGGCAGATAG 2532 0.3914 MSFSNCGYLFSVLFISCLYLLLHVSTGIDTITSASFIKDPETLISKDGNFTLGFFSSKNSTNRYVGIWWKSQSTIIWVANRNQPLNDYNGIVTISEDGNLVILNGQKRVYWSSNVSNTASNTTSQFSDFGNLVLLESTTRNILWQSIQQPSDTLLPSMKLSIDKRTGKSVNLKSWKSRFDPSVGIFSSGTVERQHIIEVFIWKETQPHWRSGPWNGGVFTGIQAMTVAYFFGFQGGDDGEGNIIVYYTIQNDGEFVFYHLNSEGILEETRWDDEKKEVRVTWTSRDSACDVYSICGAFSSCSSLNSPICSCLRGFEPRNILEWNRNDWTGGCVRRTPLQCERVNNKTKSRKEDGFLKLQMIKVPDFAQGSTVTPDICRSLCLENCSCLAYSHDDGIGCMSWTRNLLDIQQLQTGGLDLYVRVANAELDRGRNKTIIIISTTIIGTLVIFICAYIIWRRRSNQPARLWHFINSVRENNSKPFQLSNKCGAPESYTSDNRIGEMPQGKLQELLIYDFEKLATATNSFHLSNKLGQGGFGTVYKGKLQDGQEIAVKRLSSASRQGLEEFMNEVVVICKLQHRNLVRLLGCCIEGDEKLLMYEYMPNKSLDAFIFDPFKNKLLDWRTRYSIIEGIARGLLYLHRDSRLRIIHRDLKASNVLLDEELNPKISDFGMARIFGGGEDQVNTCRIVGTYGYMSPEYAMQGLFSEKSDVFSFGVLLLEIVTGKRNSNFYDNEHGQSLLGFIWTQWMENNILSLIDPEIYDSSHHNYILRHIHIGLLCVQELAADRPSMAAVISMLNSEAALSPPSSKPAFILMKNLLNSKWPEECQSVSSINNVSVTDVCGR 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi371g00014 843 Pfam PAN-like domain 350 408 IPR003609 -
Vivi371g00014 843 Pfam D-mannose binding lectin 74 176 IPR001480 -
Vivi371g00014 843 SMART ntp_6 350 422 IPR003609 -
Vivi371g00014 843 Gene3D - 23 148 IPR036426 -
Vivi371g00014 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 147 - -
Vivi371g00014 843 ProSitePatterns Protein kinases ATP-binding region signature. 531 553 IPR017441 GO:0005524
Vivi371g00014 843 CDD PAN_AP_plant 336 423 - -
Vivi371g00014 843 Gene3D Phosphorylase Kinase; domain 1 489 600 - -
Vivi371g00014 843 CDD B_lectin 37 146 IPR001480 -
Vivi371g00014 843 SMART serkin_6 525 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi371g00014 843 Gene3D Transferase(Phosphotransferase) domain 1 601 804 - -
Vivi371g00014 843 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Vivi371g00014 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 601 804 - -
Vivi371g00014 843 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Vivi371g00014 843 PIRSF SRK 2 843 IPR024171 GO:0004674
Vivi371g00014 843 CDD STKc_IRAK 531 797 - -
Vivi371g00014 843 Pfam Protein tyrosine and serine/threonine kinase 526 795 IPR001245 GO:0004672|GO:0006468
Vivi371g00014 843 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 788 - -
Vivi371g00014 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Vivi371g00014 843 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Vivi371g00014 843 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 181 IPR036426 -
Vivi371g00014 843 SUPERFAMILY Protein kinase-like (PK-like) 509 821 IPR011009 -
Vivi371g00014 843 ProSiteProfiles Protein kinase domain profile. 525 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi371g00014 843 SMART blect_4 34 150 IPR001480 -
Vivi371g00014 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 489 600 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi371g00014 425 830 Receptor kinase-like Gene Family AT4G05200 47.677 5.73e-122 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi371g00014 PK_Tyr_Ser-Thr 3.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi371g00014 - - tpra:123892366 1428.31