Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi371g00003 ATGAGTTTAAGCAAGTTTAAAAATTTGATCTCAGTTTTCAACTTCATTATATTGTTACTATGTTGTTCTTCATTACATTTAGTTCTTGTTGTTGCAACAAGCAACACCATATCATCATCATCATCATCATCATCATCACAACAACTCATGAAAGACAATGAAACTCTAAGCTCAAATAATGGAAATTTCACCTTAGGATTCTTCACCCCTCAAAACTCCACAAATCGCTATCTAGGAATTTGGTGCAAAACTCAAGACTTTGTTGTATGGGTTGCTAACAGAAACCAACCATTGGTCAATGATTCTTCTGGAGTTCTTACAATATCAAATGATGATGGCAATCTTGTTGTATTGAATGGACAAAAACATGCTATTTGGTCATCAAGTTTGACCAATGTTACATCAAAAACCAATTCTAGTTTCACACTTTCAGATTATGGAAGCCTTGTTTTGTCTGAAACAACAACAGGAGTTAAATTATGGGAGAGTTTTCAACAGCCTTCAAATGCATTATTACAAACTATGAAGTTTACAAGTAACATGACACTCACATCATGGAAAACCCTTTCTGATCCATCAAACGGAAGCTTCTCCATCGGTATCAAACTGTTGAATATTCCAGAAGTTTTCATTTGGAACGGAACTAGGCCGTACTGGCGAAGCGGTCCATGGAATAATCAAATCTTTATAGGGATACAAGACATGGCAACTCTTTTTATTTTTAACGGTTTTAAGTTTGAGAAAGACAGTAGTAAGAGTGGAACCGTTGTTTTGTCTTTCGAAGCAGAAGACTACGGACTCTTGATCTATGCCTTGAATCCGCAAGGTGAACTGCATGAAAACTCATGGAGTGATGAGGAAGAGAAATGGAACGATACATGGACTACTCATAGATCAGATTGTGATGTTTATGGTTTCTGCGGTCCATTTGGAATTTGTAATTCAGAAGGATCGCCAATTTGTAGCTGTTTGGAAGGGTTTGAAGCAAGAAACCTTCAAGAGTGGAATCAAAAAAATTGGACTAATGGATGTGTTAGGAAGAAACTTTTACAGTGTGAAGAAGCCAAAAATCAAAGCAGCAGTAGTTCACGTGGTAATGAAACCGATAGTTTTTTGCATTTGAGGACGGTAAAAGTACCCGATTTTGCAGAATTGTCATCTAATGAACAAGATGAATGCAAAAACCAGTGTTTGATGAATTGCTCTTGTACTGCATATACGTACGTGGCTAGTATTGGTTGTATGTCTTGGAATGGAAATCTAATTGATATACAACAATTTCAATCCGGAGGAACTGATCTATACATTCGCGTACCCTATGTCGAACTTCAAGTATCAGATAAAGGGCATAAACGAACAATCATCATTGCAGTTTCAGTTTCGATAGGAGTTATCATCATTGTTGCGTATTTCATTTGGATAAAGGCTTTGAAACCAGAGAGAAAAAAGAAGCATCATAGGATTTTTCATTTCCACAAAATCGAAAAACCAGAGGAACACTCAAGTGAAAATGTAATTGGTGAATTGTCACAAGCTAAGTTACAAGAGCTATTGCTGTTTAATTTTGAAAAGCTTGCAACTGCTACGAACAACTTTCATTCATCGAATAAACTTGGACAAGGAGGTTTTGGACCTGTATACAAGGGAATACTGCAAGATGATGGTAAAGAAATAGCGGTTAAGAGACTTTCAAGATCATCCGGACAAGGGTTAGAAGAATTCATGAATGAAGTAGTAGTGATTTCTAAGCTTCAACATCGCAATCTTGTAAGACTTTTAGGCTGTTGTATCGAAAGAAATGAAAAGATGTTGATGTATGAGTTCATGACAAATGGAAGTTTGGATGCATATGTTTTCGATCCTTCAAGAAATAAACTCTTGGATTGGGAGAAACGATTCAGCATAATTGAAGGAATAGCTCGTGGACTACTCTACCTACATAGAGATTCCAGGCTAAAAATCATACATAGAGATTTGAAGGCGAGTAATATCTTACTAGACGAGGAAATGAATCCAAAAATATCGGACTTTGGCATGGCCAGAATCTTTGGAGTGAGTGAAGATCATGCCAACACACAAAGGATTGTCGGAACATACGGCTATATGGCTCCAGAATATGCAATGCAAGGAGTATTTTCGGATAAGTCAGACGTGTTCAGCTTTGGAGTTTTACTGATAGAGATTGTTTGTGGAAGACGAAACTCAAGCTTTTACGAACATGAAAATTCTCTGACTCTATTAGGATTTGCATGGACTCAATGGAGGGAAGGCAATATTATATGTTTAATAGAACCAGAAATGTATGATGATAATCATCATAAGGATATTTTGAGGTGCATACATATAGGACTTTTATGTGTACAAGAATCCGCTGTAGACAGGCCTACCATGGGGACAGTGATTTATATGCTTAACAGTGAAATTATGGAACTTCCTCCTGCAAGACAACCTGCATTCCTACTGATGCAGAATATGATGAATACAGTGTGTTCTGAGGAAAGAAATGAAGTGTACTCAAATAATGATGTGACTATTACAGATCTTCATGGAAGATAG 2556 0.3678 MSLSKFKNLISVFNFIILLLCCSSLHLVLVVATSNTISSSSSSSSSQQLMKDNETLSSNNGNFTLGFFTPQNSTNRYLGIWCKTQDFVVWVANRNQPLVNDSSGVLTISNDDGNLVVLNGQKHAIWSSSLTNVTSKTNSSFTLSDYGSLVLSETTTGVKLWESFQQPSNALLQTMKFTSNMTLTSWKTLSDPSNGSFSIGIKLLNIPEVFIWNGTRPYWRSGPWNNQIFIGIQDMATLFIFNGFKFEKDSSKSGTVVLSFEAEDYGLLIYALNPQGELHENSWSDEEEKWNDTWTTHRSDCDVYGFCGPFGICNSEGSPICSCLEGFEARNLQEWNQKNWTNGCVRKKLLQCEEAKNQSSSSSRGNETDSFLHLRTVKVPDFAELSSNEQDECKNQCLMNCSCTAYTYVASIGCMSWNGNLIDIQQFQSGGTDLYIRVPYVELQVSDKGHKRTIIIAVSVSIGVIIIVAYFIWIKALKPERKKKHHRIFHFHKIEKPEEHSSENVIGELSQAKLQELLLFNFEKLATATNNFHSSNKLGQGGFGPVYKGILQDDGKEIAVKRLSRSSGQGLEEFMNEVVVISKLQHRNLVRLLGCCIERNEKMLMYEFMTNGSLDAYVFDPSRNKLLDWEKRFSIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDEEMNPKISDFGMARIFGVSEDHANTQRIVGTYGYMAPEYAMQGVFSDKSDVFSFGVLLIEIVCGRRNSSFYEHENSLTLLGFAWTQWREGNIICLIEPEMYDDNHHKDILRCIHIGLLCVQESAVDRPTMGTVIYMLNSEIMELPPARQPAFLLMQNMMNTVCSEERNEVYSNNDVTITDLHGR 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi371g00003 851 SMART ntp_6 366 438 IPR003609 -
Vivi371g00003 851 ProSiteProfiles Protein kinase domain profile. 532 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi371g00003 851 CDD PAN_AP_plant 358 439 - -
Vivi371g00003 851 Gene3D Phosphorylase Kinase; domain 1 492 608 - -
Vivi371g00003 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 36 164 - -
Vivi371g00003 851 Pfam S-locus glycoprotein domain 219 330 IPR000858 GO:0048544
Vivi371g00003 851 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 24 795 - -
Vivi371g00003 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 495 608 - -
Vivi371g00003 851 CDD STKc_IRAK 538 805 - -
Vivi371g00003 851 PIRSF SRK 11 851 IPR024171 GO:0004674
Vivi371g00003 851 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 191 IPR036426 -
Vivi371g00003 851 Gene3D Transferase(Phosphotransferase) domain 1 609 812 - -
Vivi371g00003 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Vivi371g00003 851 Pfam D-mannose binding lectin 88 185 IPR001480 -
Vivi371g00003 851 Pfam Protein tyrosine and serine/threonine kinase 534 751 IPR001245 GO:0004672|GO:0006468
Vivi371g00003 851 ProSiteProfiles PAN/Apple domain profile. 352 439 IPR003609 -
Vivi371g00003 851 ProSiteProfiles Bulb-type lectin domain profile. 41 164 IPR001480 -
Vivi371g00003 851 SUPERFAMILY Protein kinase-like (PK-like) 517 833 IPR011009 -
Vivi371g00003 851 SMART serkin_6 532 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi371g00003 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 609 812 - -
Vivi371g00003 851 CDD B_lectin 51 167 IPR001480 -
Vivi371g00003 851 Pfam PAN-like domain 366 424 IPR003609 -
Vivi371g00003 851 SMART blect_4 47 167 IPR001480 -
Vivi371g00003 851 Gene3D - 27 228 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi371g00003 454 851 Receptor kinase-like Gene Family AT4G21410 50.868 2.01e-121 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi371g00003 PK_Tyr_Ser-Thr 7.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi371g00003 - - gmx:113002415 993.03