Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi371g00002 ATGGACATACTTTATCTTTCTTATTCTACAATAATGATTTTAAGCAACTTCAAAAATTTGATCTCATTTTTCAACTTCATCACATTATTACTATGTTGTTCTTCATTCACCACGTCATCATCACTACAATTCATCAAAGACAATCAAACTCTAAGCTCAAATAGTGGAAATTTCACCTTAGGATTCTTCACCCCTCAAAACTCCACAAATCGTTATGTAGGAATTTGGTGCAAAACTCAAGACTTTGTTATATGGGTTGCTAACAGAAACCAACCTTTGATCAATGATTCCTCTGGAGTTCTCACAATATCAAATGATGGCAATCTTGTTGTATTGAATGGACAGAAACATGTTATTTGGTCATCAAGTTTGACCAATGTTACATCAAAAACCAATTCTAGTTTCACACTTTCAGATTATGGAAGCCTTATTTTGAAGGAAACAACAACAGGAAATACTATATGGGAGAGTTTTCAACAGCCTTCTAATGCATTATTACCAACCATGAAGTTTACAAGTAACATGAAACTCACATCCTGGAAAACTCCTTCTGATCCGTCGACCGGAAGCTTCTCTCTCAGTATCGAACGGTTGAAGATTCCAGAAGTTTTCATTCGGAACGGATCTCGGCCGTACTGGCGAAGTGGTCCGTGGAATAATCAAATCTTTATAGGGATACAAAACATGGAAAGTCTTTATCTTAACGGTTTTCATTTTGAGAAAGACAGTACGAGTGGAACCGTTGATTTGTATTTCAGAGCAGACGACTTCGGACTCTTGATCTATGCCTTGAATCCGCAAGGTCAAATGCACGAAAACTCATGGAGTATTGAGAAAGAGGAATGGATAGATACATGGACTAGTTATAGATCAGATTGCGATGTTTATGGATTTTGCGGTCCATACGGAATTTGTAATTCAAAAGGGTCACCAATTTGTAGCTGTTTGGAAGGGTTTGAAGCAAGAAACAAACAAGAGTGGAATCAAAAAAATTGGACTAATGGATGTGTTAGAAAGAAACTTCTACAGTGTGAAGATGCCAACAATCAAAGCAAGAGTTCACATGGTAATGAAGCAGATAGTTTTTTGAAATTGAGTACGGTAAAAGTACCCGATTTTGCAGAATTGTCATCTAATGAACAGGATGAATGCAAAAATCAGTGTTTGACGAATTGCTCTTGTACTGCATATTCGTACGTGGCTGATATCGGTTGTATGTCTTGGAATGGAAATCTAATTGATATACAACAATTCCAAACCGGAGGGACTGATCTATACATTCGTGTACCCTATGTCGAACTTGATATATCAGATAAAGAGCATAAAGGAACAATCATCATTGCAGTTTCAGTTTCGATAGGAATTATCATTATTGTGATTGTGGCGTATTTCATTTGGATAAAGGCTTCAAAACCAGCGAGGATAAAAAAGCAGCATAGGATTTTTCATTTCCACAAAATCGTAAAACCTGAAGAACACACAAATGAAAATGTTATTGGTGAATTGTCGCAAGCTAAGCTACAAGAGCTACTGCTATTTAATTTTGAAAAGCTTGCATCTGCTACAAACAACTTTCATTCATCCAATAAACTTGGACAAGGAGGTTTTGGTCCTGTGTACAAGGGAATACTAGAAGATGGTAAAGAGATAGCGGTTAAAAGACTTTCGAGATCATCTGGACAAGGGTTAGTAGAATTCATGAATGAAGTATTAGTGATTTCTAAGCTTCAACATCGCAATCTTGTAAGGCTTTTAGGCTGTTGTATCGAAAGAAATGAAAAGATGTTGATGTATGAGTTCATGTCAAATGGAAGTTTAGATGCATATATTTTCGATCCTTCAAGAAATAAACTCTTGGATTGGGAGAAACGATTCGGCATAATTGAAGGAATCGCTCGTGGACTACTCTACCTACATAGAGATTCCAGGCTAAAAATCATACATAGAGATTTGAAGGCAAGTAATATCTTACTAGATGAGGAAATGAATCCAAAAATATCGGACTTTGGTATGGCCAGAATCTTTGGAGTGAGTGAAGATCATGCCAACACACAAAGGATTGTCGGAACATACGGTTATATGGCTCCAGAATATGCAATGCAAGGAGTATTTTCGGATAAATCAGACGTCTTTAGCTTTGGAGTTTTACTGATAGAGATTGTTTGTGGAAGAAGAAACTCAAGCTTTTACGAACATGAAAATTCTCTGACTCTCTTAGGATTTGCATGGACTCAATGGAGGGAAGGCAGTATTATATGTTTAATAGAACCAGAAATATATGATGAGAGTCATCATAAGAATATTTTGAGGTGCATACATATAGGACTTTTATGTGTACAAGAATCCGCTGTTGACAGGCCTACCATGGCGACAGTGATTTCTATGCTTAACAGTGAAATTATGGAACTTCCTCCTGCAAGACAACCTGCATTCTTACTGATGCAGAATATGATGAATACAGTGTGTTCTGAGGAAAGAAATGAAGTGTACTCAAATAATGCTGTGACTGTTACAGATCTTCATGGAAGATAG 2532 0.3673 MDILYLSYSTIMILSNFKNLISFFNFITLLLCCSSFTTSSSLQFIKDNQTLSSNSGNFTLGFFTPQNSTNRYVGIWCKTQDFVIWVANRNQPLINDSSGVLTISNDGNLVVLNGQKHVIWSSSLTNVTSKTNSSFTLSDYGSLILKETTTGNTIWESFQQPSNALLPTMKFTSNMKLTSWKTPSDPSTGSFSLSIERLKIPEVFIRNGSRPYWRSGPWNNQIFIGIQNMESLYLNGFHFEKDSTSGTVDLYFRADDFGLLIYALNPQGQMHENSWSIEKEEWIDTWTSYRSDCDVYGFCGPYGICNSKGSPICSCLEGFEARNKQEWNQKNWTNGCVRKKLLQCEDANNQSKSSHGNEADSFLKLSTVKVPDFAELSSNEQDECKNQCLTNCSCTAYSYVADIGCMSWNGNLIDIQQFQTGGTDLYIRVPYVELDISDKEHKGTIIIAVSVSIGIIIIVIVAYFIWIKASKPARIKKQHRIFHFHKIVKPEEHTNENVIGELSQAKLQELLLFNFEKLASATNNFHSSNKLGQGGFGPVYKGILEDGKEIAVKRLSRSSGQGLVEFMNEVLVISKLQHRNLVRLLGCCIERNEKMLMYEFMSNGSLDAYIFDPSRNKLLDWEKRFGIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDEEMNPKISDFGMARIFGVSEDHANTQRIVGTYGYMAPEYAMQGVFSDKSDVFSFGVLLIEIVCGRRNSSFYEHENSLTLLGFAWTQWREGSIICLIEPEIYDESHHKNILRCIHIGLLCVQESAVDRPTMATVISMLNSEIMELPPARQPAFLLMQNMMNTVCSEERNEVYSNNAVTVTDLHGR 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi371g00002 843 CDD B_lectin 43 161 IPR001480 -
Vivi371g00002 843 Pfam D-mannose binding lectin 83 178 IPR001480 -
Vivi371g00002 843 Pfam PAN-like domain 357 415 IPR003609 -
Vivi371g00002 843 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 25 787 - -
Vivi371g00002 843 ProSiteProfiles Protein kinase domain profile. 525 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi371g00002 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 489 600 - -
Vivi371g00002 843 ProSiteProfiles PAN/Apple domain profile. 344 430 IPR003609 -
Vivi371g00002 843 PIRSF SRK 9 843 IPR024171 GO:0004674
Vivi371g00002 843 SUPERFAMILY Protein kinase-like (PK-like) 510 829 IPR011009 -
Vivi371g00002 843 Gene3D Phosphorylase Kinase; domain 1 486 600 - -
Vivi371g00002 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 601 804 - -
Vivi371g00002 843 SMART blect_4 42 161 IPR001480 -
Vivi371g00002 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Vivi371g00002 843 Pfam Protein tyrosine and serine/threonine kinase 527 795 IPR001245 GO:0004672|GO:0006468
Vivi371g00002 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 32 158 - -
Vivi371g00002 843 SMART serkin_6 525 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi371g00002 843 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 186 IPR036426 -
Vivi371g00002 843 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Vivi371g00002 843 SMART ntp_6 357 429 IPR003609 -
Vivi371g00002 843 CDD STKc_IRAK 531 797 - -
Vivi371g00002 843 Gene3D - 36 159 IPR036426 -
Vivi371g00002 843 ProSiteProfiles Bulb-type lectin domain profile. 36 158 IPR001480 -
Vivi371g00002 843 CDD PAN_AP_plant 354 430 - -
Vivi371g00002 843 Gene3D Transferase(Phosphotransferase) domain 1 601 804 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi371g00002 509 813 Receptor kinase-like Gene Family AT4G23150 56.721 2.88e-122 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi371g00002 PK_Tyr_Ser-Thr 4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi371g00002 - - gsj:114424251 1007.28