Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi371g00001 ATGGCCAGAATCTTTGGAGGGAATGAAGATCAAGAAAATACTCGAAGAGTTGTTGGTACTTATGGTTATATGTCTCCAGAATATGCAATGCAAGGACTCTTTTCTGATAAATCAGATGTCTTTAGCTTTGGAGTTTTGCTTCTTGAGATTATTAGTGGAAGACGAAATTCAAGCTTTTATAACTGCGAGAACTCTCTGACCCTTTTAGGATTCGTGTGGATACAATGGACAGAAGACAATATTTTACCTGTGATAGATCCAGGAATATACGATCATATACATTATAAATCCGTTTCTAGGTCCATACATATAGGACTCCTTTGTGTACAGGAATTTTCCACAGACAGGCCTACTATGGCTGTTGTGATTTCTATGCTTAATAGTGAGATTGTAGATCTTCCTCCTCCGAAGAAACCTGCATTCGTCCTGAGGCAGAATATGCTGAGCACGGTGTCGTGTGAAGAATGCAATGATGGGTTGCACTCTATCAACTTAGTCAGTATTTCAGACATCCATGGCAGATAG 525 0.3943 MARIFGGNEDQENTRRVVGTYGYMSPEYAMQGLFSDKSDVFSFGVLLLEIISGRRNSSFYNCENSLTLLGFVWIQWTEDNILPVIDPGIYDHIHYKSVSRSIHIGLLCVQEFSTDRPTMAVVISMLNSEIVDLPPPKKPAFVLRQNMLSTVSCEECNDGLHSINLVSISDIHGR 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi371g00001 174 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 5 131 - -
Vivi371g00001 174 ProSiteProfiles Protein kinase domain profile. 1 131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi371g00001 174 Pfam Domain of unknown function (DUF3403) 128 174 IPR021820 GO:0004674
Vivi371g00001 174 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 149 - -
Vivi371g00001 174 Gene3D Transferase(Phosphotransferase) domain 1 1 132 - -
Vivi371g00001 174 Pfam Protein tyrosine and serine/threonine kinase 12 123 IPR001245 GO:0004672|GO:0006468
Vivi371g00001 174 SUPERFAMILY Protein kinase-like (PK-like) 2 151 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi371g00001 1 144 Receptor kinase-like Gene Family AT4G23150 52.778 4.27e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi371g00001 PK_Tyr_Ser-Thr 1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi371g00001 - - vvo:131630202 356.295